Evidence map›Paper›PMID 20212167›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

HO* radicals induce an unexpected high proportion of tandem base lesions refractory to repair by DNA glycosylases.

François Bergeron, Frédéric Auvré, J Pablo Radicella, Jean-Luc Ravanat

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
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  6. 8-OxodGuo and Fapy•dG Mutagenicity inChemical research in toxicology · 2024
    Article
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  20. UV-Induced Charge-Transfer States in Short Guanosine-Containing DNA Oligonucleotides.Chembiochem : a European journal of chemical biology · 2020
    Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

François BergeronCommissariat à l'Energie Atomique, Institut Nanosciences et Cryogénie, Lésions des Acides Nucléiques, F-38054 Grenoble Cedex 9, France.
Frédéric Auvré
J Pablo Radicella
Jean-Luc Ravanat
Université Joseph Fourier · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInstitut de Radiobiologie Cellulaire et Moléculaire · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reaction of HO(*) radicals with double-stranded calf thymus DNA produces high levels of 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodGuo) and, to a minor extent, 8-oxo-7,8-dihydro-2'-deoxyadenosine (8-oxodAdo). Formation of the hydroxylated purine lesions is explained by addition of HO(*) to the C8 position of the purine moiety. It has been reported that tandem lesions containing a formylamine residue neighboring 8-oxodGuo could be produced through addition of a transiently generated pyrimidine peroxyl radical onto the C8 of an adjacent purine base. Formation of such tandem lesions accounted for approximately 10% of the total 8-oxodGuo. In the present work we show that addition of HO(*) onto the C8 of purine accounts for only approximately 5% of the generated 8-oxodGuo. About 50% of the 8-hydroxylated purine lesions, including 8-oxodGuo and 8-oxodAdo, are involved in tandem damage and are produced by peroxyl addition onto the C8 of a vicinal purine base. In addition, the remaining 45% of the 8-oxodGuo are produced by an electron transfer reaction, providing an explanation for the higher yield of formation of 8-oxodGuo compared to 8-oxodAdo. Interestingly, we show that >40% of the 8-oxodGuo involved in tandem lesions is refractory to excision by DNA glycosylases. Altogether our results demonstrate that, subsequently to a single oxidation event, peroxidation reactions significantly increase the yield of formation of hydroxylated purine modifications, generating a high proportion of tandem lesions partly refractory to base excision repair.

Indexed as

DNA Damage8-Hydroxy-2'-DeoxyguanosineAnimalsCattleDeoxyadenosinesDeoxyguanosineDNADNA GlycosylasesDNA RepairGamma RaysHydroxyl RadicalIn Vitro TechniquesModels, BiologicalOxidation-Reduction2'-deoxy-7,8-dihydro-8-oxoadenosine8-Hydroxy-2'-DeoxyguanosineDeoxyadenosinesDeoxyguanosineDNADNA GlycosylasesHydroxyl Radical

Identifiers

PMID20212167
PMCPMC2851781
OpenAlexW1991682155

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.