Evidence map›Paper›PMID 20212136›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Cis lethal genetic interactions attenuate and alter p53 tumorigenesis.

Yuxun Wang, Weijia Zhang, Lisa Edelmann, Richard D Kolodner, Raju Kucherlapati, Winfried Edelmann

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Yuxun WangDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA. wangy@sccp.sc.edu
Weijia Zhang
Lisa Edelmann
Richard D Kolodner
Raju Kucherlapati
Winfried Edelmann
Albert Einstein College of Medicine · USIcahn School of Medicine at Mount Sinai · USLudwig Cancer Research · USMass General Brigham · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
MOUSE MODELS FOR HUMAN CANCERU01CA084301 · NCI · YESHIVA UNIVERSITY · PI KUCHERLAPATI, RAJU S. · 1999 to 2013
$12.8M
ENZYMATIC MECHANISMS OF GENETIC RECOMBINATIONR01GM026017 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Richard D Kolodner · 1985 to 2026
$10.5M
DNA MISMATCH REPAIR AND CANCER IN MURINE MODELSR01CA076329 · NCI · YESHIVA UNIVERSITY · PI EDELMANN, WINFRIED · 1998 to 2017
$6.9M
The Role of Late MMR Proteins in DNA Repair and CancerR01CA093484 · NCI · YESHIVA UNIVERSITY · PI EDELMANN, WINFRIED · 2002 to 2011
$3.7M
ENZYMATIC MECHANISMS OF GENETIC RECOMBINATIONR37GM026017 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI KOLODNER, RICHARD D · 1992 to 2001
$759k
NCI NIH HHS CA13330NCI NIH HHS CA76329NCI NIH HHS CA84301NCI NIH HHS CA93484NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA076329NCI NIH HHS R01 CA093484NCI NIH HHS U01 CA084301NIGMS NIH HHS GM26017NIGMS NIH HHS R01 GM026017NIGMS NIH HHS R37 GM026017
6 · The paper itself

Abstract

Rpa1, an essential gene involved in DNA replication and genome maintenance, is syntenic and linked to Trp53 in mice and humans. To study the genetic interaction between Rpa1 and Trp53 in tumorigenesis, we generated compound Rpa1(L230P/+); Trp53(+/-) mutant mice with the mutant alleles in either trans or cis configuration. We demonstrate that the Rpa1(L230P) missense mutation significantly alters the tumor phenotype and spectrum of Trp53 mutant mice by modifying the genetic mechanisms underlying tumorigenesis. Importantly, when the Rpa1(L230P) and Trp53 mutant alleles are in cis, the tumor phenotype is attenuated and altered and loss of heterozygosity (LOH) at the Trp53 wild-type locus is selected against, whereas in the trans configuration, Rpa1(L230P) enhances the Trp53(+/-) tumor phenotype even though Rpa1(L230P) is ultimately lost by LOH. These studies indicate that polymorphic genetic variants in cell essential genes can genetically affect closely linked tumor suppressor loci via allelic phasing, which can result in profound phenotypic variations in tumorigenesis.

Indexed as

Genes, p53AnimalsCrosses, GeneticEpistasis, GeneticFemaleGenetic Complementation TestGenomic InstabilityLoss of HeterozygosityMaleMiceMice, Inbred C57BLMice, KnockoutMice, Mutant StrainsModels, GeneticMutation, MissenseNeoplasms, ExperimentalReplication Protein ARpa1 protein, mouse

Identifiers

PMID20212136
PMCPMC2851751
OpenAlexW2062416632

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.