Evidence map›Paper›PMID 20211661›Full record

ArticleBiochimica et biophysica acta2010

Identification of two distinct cell binding sequences in the vitamin D binding protein.

Jianhua Zhang, David M Habiel, Mahalakshmi Ramadass, Richard R Kew

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Vitamin D and COVID-19: An Overview of Recent Evidence.International journal of molecular sciences · 2021
    Review
  3. Review
  4. Review
  5. Article
  6. Vitamin D Deficiency and Rheumatoid Arthritis.Clinical reviews in allergy & immunology · 2017
    Review
  7. Observational
  8. Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jianhua ZhangDepartment of Pathology, Stony Brook University School of Medicine, Stony Brook, NY 11794-8691, USA.
David M Habiel
Mahalakshmi Ramadass
Richard R Kew
Stony Brook University · US

Funding

Mechanisms of a Novel Chemotactic Cofactor for C5aR01GM063769 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI KEW, RICHARD R · 2001 to 2011
$2.6M
MOLECULAR AND CELLULAR BIOLOGY TRAINING PROGRAMT32GM008468 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI NEIMAN, AARON M · 1997 to 2016
$1.9M
Mechanisms of a Novel Chemotactic Cofactor for C5aR56GM063769 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI KEW, RICHARD R · 2007 to 2007
$310k
NIGMS NIH HHS R01 GM063769NIGMS NIH HHS R56 GM063769NIGMS NIH HHS T32 GM008468
6 · The paper itself

Abstract

The vitamin D binding protein (DBP) is a multifunctional, albumin-like plasma protein that often requires cell surface binding to mediate some of its diverse functions. DBP binds to several different molecules on the external face of the plasma membrane indicating that it may possess distinct cell binding sequences. In this report, surface plasmon resonance was utilized to evaluate the relative binding of the human myeloid cell line U937 to immobilized recombinant expressed DBP in order to identify cell localization sequences. U937 cells showed robust binding to immobilized native DBP, but essentially no interaction when sensor chips were coated with beta(2)-microglobulin or BSA. The cell-DBP interaction was completely eliminated if cells were pretreated with soluble DBP. Recombinant DBP domains and truncated domains were next evaluated to determine the location of cell binding regions. Domains I (amino acids 1-191) and III (379-458), but not domain II (192-378), could support cell binding. Further evaluation of domain I, using truncated proteins and overlapping peptides, demonstrated that a single amino acid sequence, residues 150-172 (NYGQAPLSLLVSYTKSYLSMVGS), mediated cell binding. The domain III cell binding region was investigated using truncated versions of domain III fused to full-length domain II that served as a scaffold. These experiments indicated that the cell binding sequence is located in the first portion of that domain (379-402: ELSSFIDKGQELCADYSENTFTEY). Overlapping peptides spanning this sequence could partially block cell binding only when used in combination. We conclude that DBP contains two cell localization sequences that may be required for some of the multiple functions of this protein.

Indexed as

Glutathione TransferaseHumansPeptide FragmentsProtein BindingProtein Structure, TertiaryReceptor, Anaphylatoxin C5aReceptors, ComplementRecombinant Fusion ProteinsSurface Plasmon ResonanceU937 CellsVitamin D-Binding ProteinC5AR1 protein, humanGlutathione TransferasePeptide FragmentsReceptor, Anaphylatoxin C5aReceptors, ComplementRecombinant Fusion ProteinsVitamin D-Binding Protein

Identifiers

PMID20211661
PMCPMC2856814
OpenAlexW2131182825

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.