Evidence map›Paper›PMID 20211558›Full record

ReviewCurrent opinion in genetics & development2010

Genetic advances in glioma: susceptibility genes and networks.

Yanhong Liu, Sanjay Shete, Fay Hosking, Lindsay Robertson, Richard Houlston, Melissa Bondy

Abstract readReview
In one paragraph

Review in Current opinion in genetics & development, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 7 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 7 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Relationships between PTEN gene mutations and prognosis in glioma: a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  4. Association between GSTP1 Ile105Val polymorphism and glioma risk: a systematic review and meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  5. Associations between three XRCC1 polymorphisms and glioma risk: a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2013
    Pooled it
  6. Pooled it
  7. Pooled it
  8. Association of RNA mBioMed research international · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. An intronic genetic variation ofCancer management and research · 2018
    Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Association of single-nucleotide polymorphisms in ERCC1 and ERCC2 with glioma risk.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yanhong LiuDepartment of Epidemiology, The University of Texas M.D. Anderson Cancer Center, Houston, TX 77030, USA.
Sanjay Shete
Fay Hosking
Lindsay Robertson
Richard Houlston
Melissa Bondy

Funding

International Case Control Study of Malignant GliomaR01CA139020 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BONDY, MELISSA L. · 2010 to 2015
$16.0M
Genetic Epidemiology of Glioma International ConsortiumR01CA119215 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BONDY, MELISSA L. · 2006 to 2010
$11.9M
MOLECULAR EPIDEMIOLOGY OF GLIOMASR01CA070917 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI BONDY, MELISSA L · 1996 to 2004
$3.0M
PROTEASES IN BRIAN TUMORS PROGNOSTIC SIGNIFICANCEP01CA055261 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI LEVIN, VICTOR A · 1992 to 2000
$1.0M
NCI NIH HHS 1R01CA139020-01A1NCI NIH HHS 5R01CA070917NCI NIH HHS 5R01CA119215NCI NIH HHS P01 CA055261NCI NIH HHS R01 CA070917NCI NIH HHS R01 CA119215NCI NIH HHS R01 CA139020Wellcome Trust
6 · The paper itself

Abstract

Recent advances in human genome studies have opened new avenues for the identification of susceptibility genes for many complex genetic disorders, especially in the field of rare cancers such as glioma. To date, eight glioma susceptibility loci have been identified by candidate gene-association studies: PRKDC G6721T, XRCC1 W399R, PARP1 A762V, MGMT F84L, ERCC1 A8092C, ERCC2 Q751K, EGF +61 A/G, and IL13 R110G. Five loci have been identified by genome-wide association studies: TERT rs2736100, CCDC26 rs4295627, CDKN2A-CDKN2B rs4977756, PHLDB1 rs498872, and RTEL1 rs6010620. Using the Ingenuity Pathway Analysis tool, we investigated whether these 13 susceptibility genes are biologically related. Our data provide not only networks for understanding the biological properties of gliomagenesis but also useful pathway maps for future understanding of disease.

Indexed as

Gene Regulatory NetworksGenetic Predisposition to DiseaseGenome-Wide Association StudyGliomaHumansPolymorphism, Single Nucleotide

Identifiers

PMID20211558
PMCPMC2885452

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.