Evidence map›Paper›PMID 20210988›Full record

ArticleVirology journal2010

Decreased HIV diversity after allogeneic stem cell transplantation of an HIV-1 infected patient: a case report.

Christel Kamp, Timo Wolf, Ignacio G Bravo, Benjamin Kraus, Birgit Krause, Britta Neumann, Gudrun Winskowsky, Alexander Thielen, Albrecht Werner, Barbara S Schnierle

Abstract readCase Reports
In one paragraph

Article in Virology journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Novel cell and gene therapies for HIV.Cold Spring Harbor perspectives in medicine · 2012
    Review
  3. Review
  4. Chemokine receptor 5 knockout strategies.Current opinion in HIV and AIDS · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Christel KampPaul-Ehrlich-Institut, Paul-Ehrlich-Strasse 51-59, 63225 Langen, Germany.
Timo Wolf
Ignacio G Bravo
Benjamin Kraus
Birgit Krause
Britta Neumann
Gudrun Winskowsky
Alexander Thielen
Albrecht Werner
Barbara S Schnierle

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human immunodeficiency virus type 1 (HIV-1) coreceptor use and viral evolution were analyzed in blood samples from an HIV-1 infected patient undergoing allogeneic stem cell transplantation (SCT). Coreceptor use was predicted in silico from sequence data obtained from the third variable loop region of the viral envelope gene with two software tools. Viral diversity and evolution was evaluated on the same samples by Bayesian inference and maximum likelihood methods. In addition, phenotypic analysis was done by comparison of viral growth in peripheral blood mononuclear cells and in a CCR5 (R5)-deficient T-cell line which was controlled by a reporter assay confirming viral tropism. In silico coreceptor predictions did not match experimental determinations that showed a consistent R5 tropism. Anti-HIV directed antibodies could be detected before and after the SCT. These preexisting antibodies did not prevent viral rebound after the interruption of antiretroviral therapy during the SCT. Eventually, transplantation and readministration of anti-retroviral drugs lead to sustained increase in CD4 counts and decreased viral load to undetectable levels. Unexpectedly, viral diversity decreased after successful SCT. Our data evidence that only R5-tropic virus was found in the patient before and after transplantation. Therefore, blocking CCR5 receptor during stem cell transplantation might have had beneficial effects and this might apply to more patients undergoing allogeneic stem cell transplantation. Furthermore, we revealed a scenario of HIV-1 dynamic different from the commonly described ones. Analysis of viral evolution shows the decrease of viral diversity even during episodes with bursts in viral load.

Indexed as

Genetic VariationStem Cell TransplantationAdultAnti-HIV AgentsCD4 Lymphocyte CountCell LineCells, CulturedCluster AnalysisHIV-1HIV AntibodiesHIV Envelope Protein gp120HIV InfectionsHumansMalePhylogenyReceptors, HIVAnti-HIV Agentsgp120 protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp120Receptors, HIV

Identifiers

PMID20210988
PMCPMC2845567

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.