Evidence map›Paper›PMID 20208156›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2010

Two-step counterdiffusion protocol for the crystallization of haemoglobin II from Lucina pectinata in the pH range 4-9.

Carlos A Nieves-Marrero, Carlos R Ruiz-Martínez, Rafael A Estremera-Andújar, Luis A González-Ramírez, Juan López-Garriga, José A Gavira

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Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4citing papers in PubMed
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3 · Its place in the literature

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4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Carlos A Nieves-MarreroChemistry Department, PO Box 9019, University of Puerto Rico, Mayagüez Campus, Mayagüez, Puerto Rico.
Carlos R Ruiz-Martínez
Rafael A Estremera-Andújar
Luis A González-Ramírez
Juan López-Garriga
José A Gavira

Funding

Unraveling the Reaction between Heme (FeIV=O) Moiety and H2SS06GM008103 · NIGMS · UNIVERSITY OF PUERTO RICO MAYAGUEZ · PI LOPEZ-GARRIGA, JUAN · 1989 to 2010
$10.6M
MIRT IN MOLECULAR BIOLOGY AND INFECTIOUS DISEASEST37TW000096 · FIC · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI HILLYER, GEORGE V · 2000 to 2004
$794k
FIC NIH HHS 5T37TW000096FIC NIH HHS T37 TW000096NIGMS NIH HHS 2 S06GM08103-34NIGMS NIH HHS S06 GM008103
6 · The paper itself

Abstract

Lucina pectinata haemoglobin II (HbII) transports oxygen in the presence of H(2)S to the symbiotic system in this bivalve mollusc. The composition of the haem pocket at the distal site includes TyrB10 and GlnE7, which are very common in other haem proteins. Obtaining crystals of oxyHbII at various pH values is required in order to elucidate the changes in the conformations of TyrB10 and GlnE7 and structural scenarios induced by changes in pH. Here, the growth of crystals of oxyHbII using the capillary counterdiffusion (CCD) technique at various pH values using a two-step protocol is reported. In the first step, a mini-screen was used to validate sodium formate as the best precipitating reagent for the growth of oxyHbII crystals. The second step, a pH screen typically used for optimization, was used to produce crystals in the pH range 4-9. Very well faceted prismatic ruby-red crystals were obtained at all pH values. X-ray data sets were acquired using synchrotron radiation of wavelength 0.886 A (for the crystals obtained at pH 5) and 0.908 A (for those obtained at pH 4, 8 and 9) to maximum resolutions of 3.30, 1.95, 1.85 and 2.00 A for the crystals obtained at pH 4, 5, 8 and 9, respectively. All of the crystals were isomorphous and belonged to space group P4(2)2(1)2.

Indexed as

AnimalsBivalviaCrystallizationHemoglobinsHydrogen-Ion ConcentrationX-Ray DiffractionHemoglobins

Identifiers

PMID20208156
PMCPMC2833032

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.