Evidence map›Paper›PMID 20206917›Full record

ArticleCarbohydrate research2010

Enzymatic synthesis of Gb3 and iGb3 ceramides.

Dietlind Adlercreutz, Joel T Weadge, Bent O Petersen, Jens Ø Duus, Norman J Dovichi, Monica M Palcic

Open access · greenAbstract read
In one paragraph

Article in Carbohydrate research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Thiogalactopyranosides are resistant to hydrolysis by α-galactosidases.Chembiochem : a European journal of chemical biology · 2012
    Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Dietlind AdlercreutzCarlsberg Laboratory, Gamle Carlsberg Vej 10, DK-2500 Valby, Denmark.
Joel T Weadge
Bent O Petersen
Jens Ø Duus
Norman J Dovichi
Monica M Palcic
Carlsberg Laboratory · DKUniversity of Washington · US

Funding

Glycolipid metabolism in single cellsR01NS061767 · NINDS · UNIVERSITY OF WASHINGTON · PI DOVICHI, NORMAN J · 2007 to 2011
$1.8M
NINDS NIH HHS R01 NS061767NINDS NIH HHS R01NS061767
6 · The paper itself

Abstract

Gb3 and iGb3 are physiologically important trihexosylceramides with a terminal alpha-d-Galp-(1-->4)-beta-d-Galp- and alpha-d-Galp-(1-->3)-beta-d-Galp sequence, respectively. In particular iGb3 is attracting considerable attention as it is believed to serve as a ligand for natural killer T cells. Whether or not iGb3 is present in humans and which enzyme might be responsible for its synthesis is at present a matter of lively debate. In the current investigation we evaluated human blood group B galactosyltransferase (GTB) for its ability to catalyze the formation of iGb3 from lactosylceramide and UDP-Galp. GTB is a retaining glycosyltransferase that in vivo catalyzes the transfer of galactose from UDP-Galp donors to OH-3 of Galp on the H-antigen (alpha-l-Fucp-(1-->2)-beta-d-Galp) acceptor forming the blood group B antigen. GTB tolerates modifications in donor and acceptor substrates and its ability to accept lactosides as acceptors makes it a possible candidate for iGb3 production in humans. For comparison iGb3 and Gb3 were also synthesized from the same acceptor using an alpha-(1-->3)- and alpha-(1-->4)-specific galactosyltransferase, respectively. All the enzymes tested catalyzed the desired reactions. Product characterization by NMR analysis clearly differentiated between the alpha-Galp-(1-->3)-Galp and alpha-Galp-(1-->4)-Galp product, with the GTB product being identical to that of the alpha-(1-->3)-GalT-catalyzed reaction. The rate of transfer by GTB however was very low, only 0.001% of the rate obtained with a good substrate, H antigen disaccharide (octyl alpha-l-Fucp-(1-->2)-beta-d-Galp). This is too low to account for the possible formation of the iGb3 structure in humans in vivo.

Indexed as

AnimalsCarbohydrate SequenceCattleGalactosyltransferasesGlobosidesHumansLactosylceramidesNeisseria meningitidisTrihexosylceramidesUridine Diphosphate GalactoseGalactosyltransferasesGlobosidesglobotrihexosylceramideisoglobotrihexosylceramideLactosylceramidesTrihexosylceramidesUridine Diphosphate Galactose

Identifiers

PMID20206917
PMCPMC3282984
OpenAlexW1995658604

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.