ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2010
Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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38 citing papers in PubMed, 125 citations in OpenAlex.
- Characterization ofCurrent issues in molecular biology · 2026Article
- Acetaminophen production in the edible, filamentous cyanobacterium Arthrospira platensis.Biotechnology and bioengineering · 2025Article
- Spirulina/Arthrospira/Limnospira-Three Names of the Single Organism.Foods (Basel, Switzerland) · 2024Review
- Microcystins and Cyanobacterial Contaminants in the French Small-Scale Productions of Spirulina (Toxins · 2023Article
- Complete Genome Sequence of the Edible Filamentous Cyanobacterium Arthrospira platensis NIES-39, Based on Long-Read Sequencing.Microbiology resource announcements · 2023Article
- Arthrospira platensis-Mediated Green Biosynthesis of Silver Nano-particles as Breast Cancer Controlling Agent: In Vitro and In Vivo Safety Approaches.Applied biochemistry and biotechnology · 2022Article
- Article
- Bioactive Metabolites Produced by Cyanobacteria for Growth Adaptation and Their Pharmacological Properties.Biology · 2021Review
- Differential response of photosynthetic apparatus towards alkaline pH treatment in NIES-39 and PCC 7345 strains of Arthrospira platensis.International microbiology : the official journal of the Spanish Society for Microbiology · 2021Article
- Article
- Comprehensive Analyses of Cytochrome P450 Monooxygenases and Secondary Metabolite Biosynthetic Gene Clusters inInternational journal of molecular sciences · 2020Article
- Emerging Species and Genome Editing Tools: Future Prospects in Cyanobacterial Synthetic Biology.Microorganisms · 2019Review
- Analysis of seven putative NaPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- The Draft Genome of a Hydrogen-producing Cyanobacterium,Journal of genomics · 2019Article
- Molecular insight into the metabolic activities of a protein-rich micro alga, Arthrospira platensis by de novo transcriptome analysis.Molecular biology reports · 2018Article
- Genome Sequence and Composition of a Tolyporphin-Producing Cyanobacterium-Microbial Community.Applied and environmental microbiology · 2017Article
- In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria.BMC genomics · 2017Article
- Exploring Components of the COComputational and structural biotechnology journal · 2017Article
- Edible Cyanobacterial GenusFrontiers in microbiology · 2017Review
- Whole genomic DNA sequencing and comparative genomic analysis of Arthrospira platensis: high genome plasticity and genetic diversity.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
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Authors and funding
23 authors at 8 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A filamentous non-N(2)-fixing cyanobacterium, Arthrospira (Spirulina) platensis, is an important organism for industrial applications and as a food supply. Almost the complete genome of A. platensis NIES-39 was determined in this study. The genome structure of A. platensis is estimated to be a single, circular chromosome of 6.8 Mb, based on optical mapping. Annotation of this 6.7 Mb sequence yielded 6630 protein-coding genes as well as two sets of rRNA genes and 40 tRNA genes. Of the protein-coding genes, 78% are similar to those of other organisms; the remaining 22% are currently unknown. A total 612 kb of the genome comprise group II introns, insertion sequences and some repetitive elements. Group I introns are located in a protein-coding region. Abundant restriction-modification systems were determined. Unique features in the gene composition were noted, particularly in a large number of genes for adenylate cyclase and haemolysin-like Ca(2+)-binding proteins and in chemotaxis proteins. Filament-specific genes were highlighted by comparative genomic analysis.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.