ArticleBMC microbiology2010
Strategies of Nitrosomonas europaea 19718 to counter low dissolved oxygen and high nitrite concentrations.
Article in BMC microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
24 citing papers in PubMed, 162 citations in OpenAlex.
- Article
- Potential pathogens drive ARGs enrichment during biofilms formation on environmental surfaces.ISME communications · 2025Article
- The impact of different preceding crops on soil nitrogen structure and nitrogen cycling in tobacco-planting soil.Scientific reports · 2024Article
- Role of Nitric Oxide in Hydroxylamine Oxidation by Ammonia-Oxidizing Bacteria.Applied and environmental microbiology · 2023Article
- Proterozoic Acquisition of Archaeal Genes for Extracellular Electron Transfer: A Metabolic Adaptation of Aerobic Ammonia-Oxidizing Bacteria to Oxygen Limitation.Molecular biology and evolution · 2023Article
- Nitrogen cycling and microbial cooperation in the terrestrial subsurface.The ISME journal · 2022Article
- Urea fertilization and grass species alter microbial nitrogen cycling capacity and activity in a CPeerJ · 2022Article
- Exploring the Meta-regulon of the CRP/FNR Family of Global Transcriptional Regulators in a Partial-Nitritation Anammox Microbiome.mSystems · 2021Article
- Article
- Ammonia-oxidizing bacterial communities are affected by nitrogen fertilization and grass species in native CPeerJ · 2021Article
- Small Sample Stress: Probing Oxygen-Deprived Ammonia-Oxidizing Bacteria with Raman Spectroscopy In Vivo.Microorganisms · 2020Article
- Transcriptomic Response of Nitrosomonas europaea Transitioned from Ammonia- to Oxygen-Limited Steady-State Growth.mSystems · 2020Article
- Article
- Metatranscriptomic Investigation of Adaptation in NO and NFrontiers in microbiology · 2018Article
- Metabolic and Proteomic Responses to Salinity in Synthetic Nitrifying Communities ofFrontiers in microbiology · 2018Article
- Physiological and transcriptional responses of Nitrosomonas europaea to TiO2 and ZnO nanoparticles and their mixtures.Environmental science and pollution research international · 2016Article
- High cell density cultivation of the chemolithoautotrophic bacterium Nitrosomonas europaea.Folia microbiologica · 2016Article
- Use of functional gene expression and respirometry to study wastewater nitrification activity after exposure to low doses of copper.Environmental science and pollution research international · 2016Article
- Comparison of Nitrogen Oxide Metabolism among Diverse Ammonia-Oxidizing Bacteria.Frontiers in microbiology · 2016Article
- Effect of Low-Density Static Magnetic Field on the Oxidation of Ammonium byFood technology and biotechnology · 2015Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundNitrosomonas europaea is a widely studied chemolithoautotrophic ammonia oxidizing bacterium. While significant work exists on the ammonia oxidation pathway of N. europaea, its responses to factors such as dissolved oxygen limitation or sufficiency or exposure to high nitrite concentrations, particularly at the functional gene transcription level are relatively sparse. The principal goal of this study was to investigate responses at the whole-cell activity and gene transcript levels in N. europaea 19718 batch cultures, which were cultivated at different dissolved oxygen and nitrite concentrations. Transcription of genes coding for principal metabolic pathways including ammonia oxidation (amoA), hydroxylamine oxidation (hao), nitrite reduction (nirK) and nitric oxide reduction (norB) were quantitatively measured during batch growth, at a range of DO concentrations (0.5, 1.5 and 3.0 mg O2/L). Measurements were also conducted during growth at 1.5 mg O2/L in the presence of 280 mg-N/L of externally added nitrite.
resultsSeveral wide ranging responses to DO limitation and nitrite toxicity were observed in N. europaea batch cultures. In contrast to our initial hypothesis, exponential phase mRNA concentrations of both amoA and hao increased with decreasing DO concentrations, suggesting a mechanism to metabolize ammonia and hydroxylamine more effectively under DO limitation. Batch growth in the presence of 280 mg nitrite-N/L resulted in elevated exponential phase nirK and norB mRNA concentrations, potentially to promote utilization of nitrite as an electron acceptor and to detoxify nitrite. This response was in keeping with our initial hypothesis and congruent with similar responses in heterotrophic denitrifying bacteria. Stationary phase responses were distinct from exponential phase responses in most cases, suggesting a strong impact of ammonia availability and metabolism on responses to DO limitation and nitrite toxicity. In general, whole-cell responses to DO limitation or nitrite toxicity, such as sOUR or nitrite reduction to nitric oxide (NO) did not parallel the corresponding mRNA (nirK) profiles, suggesting differences between the gene transcription and enzyme translation or activity levels.
conclusionsThe results of this study show that N. europaea possesses specific mechanisms to cope with growth under low DO concentrations and high nitrite concentrations. These mechanisms are additionally influenced by the physiological growth state of N. europaea cultures and are possibly geared to enable more efficient substrate utilization or nitrite detoxification.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.