Evidence map›Paper›PMID 20200071›Full record

ArticlePlant physiology2010

Auxin metabolism and function in the multicellular brown alga Ectocarpus siliculosus.

Aude Le Bail, Bernard Billoud, Nathalie Kowalczyk, Mariusz Kowalczyk, Morgane Gicquel, Sophie Le Panse, Sarah Stewart, Delphine Scornet, Jeremy Mark Cock, Karin Ljung and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 117 citations in OpenAlex.

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  16. On the Evolutionary Origins of Land Plant Auxin Biology.Cold Spring Harbor perspectives in biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Aude Le BailCNRS-Université Pierre et Marie Curie, UMR 7139 Marine Plants and Biomolecules, and Platform of Cytology, CNRS FR2424, Station Biologique de Roscoff, 29682 Roscoff Cedex, France.
Bernard Billoud
Nathalie Kowalczyk
Mariusz Kowalczyk
Morgane Gicquel
Sophie Le Panse
Sarah Stewart
Delphine Scornet
Jeremy Mark Cock
Karin Ljung
Bénédicte Charrier
Umeå Plant Science Centre · SECentre National de la Recherche Scientifique · FRStation Biologique de Roscoff · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ectocarpus siliculosus is a small brown alga that has recently been developed as a genetic model. Its thallus is filamentous, initially organized as a main primary filament composed of elongated cells and round cells, from which branches differentiate. Modeling of its early development suggests the involvement of very local positional information mediated by cell-cell recognition. However, this model also indicates that an additional mechanism is required to ensure proper organization of the branching pattern. In this paper, we show that auxin indole-3-acetic acid (IAA) is detectable in mature E. siliculosus organisms and that it is present mainly at the apices of the filaments in the early stages of development. An in silico survey of auxin biosynthesis, conjugation, response, and transport genes showed that mainly IAA biosynthesis genes from land plants have homologs in the E. siliculosus genome. In addition, application of exogenous auxins and 2,3,5-triiodobenzoic acid had different effects depending on the developmental stage of the organism, and we propose a model in which auxin is involved in the negative control of progression in the developmental program. Furthermore, we identified an auxin-inducible gene called EsGRP1 from a small-scale microarray experiment and showed that its expression in a series of morphogenetic mutants was positively correlated with both their elongated-to-round cell ratio and their progression in the developmental program. Altogether, these data suggest that IAA is used by the brown alga Ectocarpus to relay cell-cell positional information and induces a signaling pathway different from that known in land plants.

Indexed as

MorphogenesisAmino Acid SequenceIndoleacetic AcidsMolecular Sequence DataMutationPhaeophyceaeSignal TransductionIndoleacetic Acids

Identifiers

PMID20200071
PMCPMC2862433
OpenAlexW1988746046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.