Evidence map›Paper›PMID 20198467›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010

Identification of a second major resistance gene to Rice yellow mottle virus, RYMV2, in the African cultivated rice species, O. glaberrima.

Deless Thiémélé, Arnaud Boisnard, Marie-Noëlle Ndjiondjop, Sophie Chéron, Yacouba Séré, Séverin Aké, Alain Ghesquière, Laurence Albar

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 108 citations in OpenAlex.

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  13. Genetic characterization and fine mapping ofMolecular breeding : new strategies in plant improvement · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Deless ThiéméléLaboratoire Génome et Développement des Plantes, Unité Mixte de Recherche 5096, Université de Perpignan via Domitia, CNRS, IRD, BP 64501, 34394, Montpellier Cedex 5, France.
Arnaud Boisnard
Marie-Noëlle Ndjiondjop
Sophie Chéron
Yacouba Séré
Séverin Aké
Alain Ghesquière
Laurence Albar
Africa Rice Center · BJLaboratoire Génome et Développement des Plantes · FRCentre National de la Recherche Scientifique · FRInstitut de Recherche pour le Développement · FRUniversité de Perpignan · FRUniversité Félix Houphouët-Boigny · CI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice yellow mottle virus (RYMV) is the most damaging rice-infecting virus in Africa. However, few sources of high resistance and only a single major resistance gene, RYMV1, are known to date. We screened a large representative collection of African cultivated rice (Oryza glaberrima) for RYMV resistance. Whereas high resistance is known to be very rare in Asian cultivated rice (Oryza sativa), we identified 29 (8%) highly resistant accessions in O. glaberrima. The MIF4G domain of RYMV1 was sequenced in these accessions. Some accessions possessed the rymv1-3 or rymv1-4 recessive resistance alleles previously described in O. glaberrima Tog5681 and Tog5672, respectively, and a new allele, rymv1-5, was identified, thereby increasing the number of resistance alleles in O. glaberrima to three. In contrast, only a single allele has been reported in O. sativa. Markers specific to the different alleles of the RYMV1 gene were developed for marker-assisted selection of resistant genotypes for disease management. In addition, the presence of the dominant susceptibility allele (Rymv1-1) in 15 resistant accessions suggests that their resistance is under different genetic control. An allelism test involving one of those accessions revealed a second major resistance gene, i.e., RYMV2. The diversity of resistance genes against RYMV in O. glaberrima species is discussed in relation to the diversification of the virus in Africa.

Indexed as

OryzaPlant DiseasesAfricaAllelesAmino Acid SequenceCrops, AgriculturalGenes, PlantGenetic MarkersImmunity, InnateMolecular Sequence DataPhenotypePlant VirusesGenetic Markers

Identifiers

PMID20198467
OpenAlexW2083915115

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.