ArticleFrontiers in neuroscience2009
Trends in programming languages for neuroscience simulations.
Article in Frontiers in neuroscience, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- NeuroConstruct-based implementation of structured-light stimulated retinal circuitry.BMC neuroscience · 2020Article
- Article
- c302: a multiscale framework for modelling the nervous system ofPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018Article
- Dynamic Communications Between GABAFrontiers in cellular neuroscience · 2018Article
- Integrating the Allen Brain Institute Cell Types Database into Automated Neuroscience Workflow.Neuroinformatics · 2017Article
- Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON.Neural computation · 2016Article
- Reproducibility in Computational Neuroscience Models and Simulations.IEEE transactions on bio-medical engineering · 2016Article
- Python in neuroscience.Frontiers in neuroinformatics · 2015Article
- Computational modeling predicts the ionic mechanism of late-onset responses in unipolar brush cells.Frontiers in cellular neuroscience · 2014Article
- Stimfit: quantifying electrophysiological data with Python.Frontiers in neuroinformatics · 2014Article
- NEVESIM: event-driven neural simulation framework with a Python interface.Frontiers in neuroinformatics · 2014Article
- 3D brain atlas reconstructor service--online repository of three-dimensional models of brain structures.Neuroinformatics · 2013Article
- Reaction-diffusion in the NEURON simulator.Frontiers in neuroinformatics · 2013Article
- A frontier in the understanding of synaptic plasticity: solving the structure of the postsynaptic density.BioEssays : news and reviews in molecular, cellular and developmental biology · 2012Review
- Common atlas format and 3D brain atlas reconstructor: infrastructure for constructing 3D brain atlases.Neuroinformatics · 2012Article
- Democratic population decisions result in robust policy-gradient learning: a parametric study with GPU simulations.PloS one · 2011Article
- Tunable neuromimetic integrated system for emulating cortical neuron models.Frontiers in neuroscience · 2011Article
- The connectome viewer toolkit: an open source framework to manage, analyze, and visualize connectomes.Frontiers in neuroinformatics · 2011Article
Corrections and comments
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Authors and funding
3 authors.
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Abstract
Neuroscience simulators allow scientists to express models in terms of biological concepts, without having to concern themselves with low-level computational details of their implementation. The expressiveness, power and ease-of-use of the simulator interface is critical in efficiently and accurately translating ideas into a working simulation. We review long-term trends in the development of programmable simulator interfaces, and examine the benefits of moving from proprietary, domain-specific languages to modern dynamic general-purpose languages, in particular Python, which provide neuroscientists with an interactive and expressive simulation development environment and easy access to state-of-the-art general-purpose tools for scientific computing.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.