Evidence map›Paper›PMID 20197273›Full record

ArticleThe Journal of biological chemistry2010

The importin beta binding domain modulates the avidity of importin beta for the nuclear pore complex.

Kaylen Lott, Anshul Bhardwaj, Gregory Mitrousis, Nelly Pante, Gino Cingolani

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 41 citations in OpenAlex.

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  20. Disordered proteinaceous machines.Chemical reviews · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Kaylen LottDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, Pennsylvania 19107, USA.
Anshul Bhardwaj
Gregory Mitrousis
Nelly Pante
Gino Cingolani
SUNY Upstate Medical University · USThomas Jefferson University · USUniversity of British Columbia · CA

Funding

Molecular Basis for Recognition and Nuclear Import of Non-classical NLS CargosR01GM074846 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI CINGOLANI, GINO · 2006 to 2010
$1.3M
NIGMS NIH HHS GM074846-01A1NIGMS NIH HHS R01 GM074846
6 · The paper itself

Abstract

Importin beta mediates active passage of cellular substrates through the nuclear pore complex (NPC). Adaptors such as importin alpha and snurportin associate with importin beta via an importin beta binding (IBB) domain. The intrinsic structural flexibility of importin beta allows its concerted interactions with IBB domains, phenylalanine-glycine nucleoporins, and the GTPase Ran during transport. In this paper, we provide evidence that the nature of the IBB domain modulates the affinity of the import complex for the NPC. In permeabilized cells, importin beta imports a cargo fused to the snurportin IBB (sIBB) with approximately 70% reduced energy requirement as compared with the classical importin alpha IBB. At the molecular level, this is explained by approximately 200-fold reduced affinity of importin beta for Nup62, when bound to the sIBB. Consistently, in vivo, the importin beta.sIBB complex has greatly reduced persistence inside the central channel of the NPC. We propose that by controlling the degree of strain in the tertiary structure of importin beta, the IBB domain modulates the affinity of the import complex for nucleoporins, thus dictating its persistence inside the NPC.

Indexed as

alpha Karyopherinsbeta KaryopherinsHeLa CellsHumansMembrane GlycoproteinsNuclear PoreNuclear Pore Complex ProteinsProtein Structure, Tertiaryran GTP-Binding ProteinReceptors, Cytoplasmic and NuclearRNA Cap-Binding Proteinsalpha Karyopherinsbeta KaryopherinsMembrane GlycoproteinsNuclear Pore Complex Proteinsnuclear pore protein p62ran GTP-Binding ProteinRAN protein, humanReceptors, Cytoplasmic and NuclearRNA Cap-Binding ProteinsSNUPN protein, human

Identifiers

PMID20197273
PMCPMC2859540
OpenAlexW2032258002

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.