Evidence map›Paper›PMID 20195536›Full record

ArticlePloS one2010

The genome of Streptococcus mitis B6--what is a commensal?

Dalia Denapaite, Reinhold Brückner, Michael Nuhn, Peter Reichmann, Bernhard Henrich, Patrick Maurer, Yvonne Schähle, Peter Selbmann, Wolfgang Zimmermann, Rolf Wambutt and 1 more

Abstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed.

  1. The Clinical Significance ofOpen forum infectious diseases · 2026
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  10. Probiotic Effect ofPathogens (Basel, Switzerland) · 2024
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  11. Molecular characterization of theFrontiers in veterinary science · 2024
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  12. Antibiotics (Basel, Switzerland) · 2023
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  13. An Isolate ofNutrients · 2023
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  17. The Role of SilX in Bacteriocin Production ofFrontiers in microbiology · 2022
    Article
  18. Review
  19. Tandem sialoglycan-binding modules in aThe Journal of biological chemistry · 2020
    Article
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Dalia DenapaiteDepartment of Microbiology, University of Kaiserslautern, Kaiserslautern, Germany.
Reinhold Brückner
Michael Nuhn
Peter Reichmann
Bernhard Henrich
Patrick Maurer
Yvonne Schähle
Peter Selbmann
Wolfgang Zimmermann
Rolf Wambutt
Regine Hakenbeck

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptococcus mitis is the closest relative of the major human pathogen S. pneumoniae. The 2,15 Mb sequence of the Streptococcus mitis B6 chromosome, an unusually high-level beta-lactam resistant and multiple antibiotic resistant strain, has now been determined to encode 2100 genes. The accessory genome is estimated to represent over 40%, including 75 mostly novel transposases and IS, the prophage phiB6 and another seven phage related regions. Tetracycline resistance mediated by Tn5801, and an unusual and large gene cluster containing three aminoglycoside resistance determinants have not been described in other Streptococcus spp. Comparative genomic analyses including hybridization experiments on a S. mitis B6 specific microarray reveal that individual S. mitis strains are almost as distantly related to the B6 strain as S. pneumoniae. Both species share a core of over 900 genes. Most proteins described as pneumococcal virulence factors are present in S. mitis B6, but the three choline binding proteins PcpA, PspA and PspC, and three gene clusters containing the hyaluronidase gene, ply and lytA, and the capsular genes are absent in S. mitis B6 and other S. mitis as well and confirm their importance for the pathogenetic potential of S. pneumoniae. Despite the close relatedness between the two species, the S. mitis B6 genome reveals a striking X-alignment when compared with S. pneumoniae.

Indexed as

Amino Acid SequenceBacterial ProteinsBase SequenceChromosome MappingChromosomes, BacterialComparative Genomic HybridizationDNA, BacterialDNA Transposable ElementsGenome, BacterialMolecular Sequence DataPhylogenySequence Analysis, DNASequence Homology, Amino AcidSpecies SpecificityStreptococcus mitisStreptococcus pneumoniaeBacterial ProteinsDNA, BacterialDNA Transposable ElementsVirulence Factors

Identifiers

PMID20195536
PMCPMC2828477

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.