Evidence map›Paper›PMID 20194699›Full record

ArticleAntimicrobial agents and chemotherapy2010

Use of a high-resolution melt assay to characterize codon 54 of the cyp51A gene of Aspergillus fumigatus on a Rotor-Gene 6000 instrument.

M J Tuohy, V Reja, S Park, D S Perlin, M Wnek, G W Procop, B Yen-Lieberman

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Detecting Azole-Antifungal Resistance inJournal of fungi (Basel, Switzerland) · 2020
    Review
  2. Article
  3. Detection ofFrontiers in microbiology · 2016
    Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

M J TuohyCleveland Clinic, Cleveland, OH 44195, USA. tuohym@ccf.org
V Reja
S Park
D S Perlin
M Wnek
G W Procop
B Yen-Lieberman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A high-resolution melt (HRM) assay using a Rotor-Gene 6000 instrument was developed to characterize the codon for glycine 54 in the cyp51A genes from 13 reference isolates and 12 clinical isolates of Aspergillus fumigatus. Mutations in this codon confer reduced susceptibility to itraconazole and posaconazole. The assay is simple to perform, and a result of "wild type" or "mutant" is available after approximately 1 h following DNA extraction using commercially available reagents and conventional primers.

Indexed as

Antifungal AgentsAspergillus fumigatusCodonCytochrome P-450 Enzyme SystemDrug Resistance, FungalFungal ProteinsGenes, FungalGenetic TestingGlycineItraconazoleMicrobial Sensitivity TestsNucleic Acid DenaturationSequence Analysis, DNATriazolesAntifungal AgentsCodoncytochrome P-450 CYP51A, AspergillusCytochrome P-450 Enzyme SystemFungal ProteinsGlycineItraconazoleposaconazoleTriazoles

Identifiers

PMID20194699
PMCPMC2863670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.