Evidence map›Paper›PMID 20193061›Full record

ArticleBMC evolutionary biology2010

Molecular differentiation of commercial varieties and feral populations of oilseed rape (Brassica napus L.).

Kathrin Pascher, Susanne Macalka, Domenico Rau, Günter Gollmann, Helmut Reiner, Josef Glössl, Georg Grabherr

Abstract read
In one paragraph

Article in BMC evolutionary biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kathrin PascherUniversity of Vienna, Department of Conservation Biology, Vegetation Ecology and Landscape Ecology, Rennweg 14, Vienna, Austria. kathrin.pascher@univie.ac.at
Susanne Macalka
Domenico Rau
Günter Gollmann
Helmut Reiner
Josef Glössl
Georg Grabherr

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFor assessing the risk of escape of transgenes from cultivation, the persistence of feral populations of crop plants is an important aspect. Feral populations of oilseed rape, Brassica napus, are well known, but only scarce information is available on their population dynamics, particularly in Central Europe. To investigate genetic diversity, origin and persistence of feral oilseed rape in Austria, we compared variation at nine polymorphic microsatellite loci in eight feral populations with 19 commercial varieties.

resultsOverall, commercial varieties and feral populations showed a similar pattern of genetic variation and a similar level of observed heterozygosity. The two groups, however, shared less than 50% of the alleles and no multilocus genotype. A significant among-group (commercial varieties versus feral populations) component of genetic variation was observed (AMOVA: FCT = 0.132). Pairwise comparisons between varieties and feral populations showed moderate to very high genetic differentiation (FST = 0.209 - 0.900). The software STRUCTURE also demonstrated a clear separation between commercial varieties and feral samples: out of 17 identified genetic clusters, only one comprised plants from both a commercial variety and feral sites.

conclusionsThe results suggest that feral oilseed rape is able to maintain persistent populations. The feral populations may have derived from older cultivars that were not included in our analyses or perhaps have already hybridised with related crops or wild relatives. Feral populations therefore have to be considered in ecological risk assessment and future coexistence measures as a potential hybridisation partner of transgenic oilseed rape.

Indexed as

Genetic VariationAustriaBrassica napusMicrosatellite RepeatsPhylogenyPlants, Genetically ModifiedTransgenes

Identifiers

PMID20193061
PMCPMC2848156

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