Evidence map›Paper›PMID 20192823›Full record

ArticleMolecular plant-microbe interactions : MPMI2010

Role of the Sinorhizobium meliloti global regulator Hfq in gene regulation and symbiosis.

Mengsheng Gao, Melanie J Barnett, Sharon R Long, Max Teplitski

Abstract read
In one paragraph

Article in Molecular plant-microbe interactions : MPMI, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. TheFrontiers in microbiology · 2022
    Article
  2. A comprehensive review of small regulatory RNAs inFrontiers in veterinary science · 2022
    Review
  3. Microbiology and molecular biology reviews : MMBR · 2021
    Review
  4. Review
  5. Article
  6. Article
  7. Use of RNA Immunoprecipitation Method for DeterminingBiological procedures online · 2018
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mengsheng Gao *Soil and Water Science Department, Cancer and Genetics Research Complex, Room 330E, University of Florida-Institute of Food and Agricultural Sciences, Gainesville 32610, U.S.A.
Melanie J Barnett *Department of Biology, Stanford University, Stanford, CA 94305-5020, U.S.A.
Sharon R LongDepartment of Biology, Stanford University, Stanford, CA 94305-5020, U.S.A.
Max TeplitskiSoil and Water Science Department, Cancer and Genetics Research Complex, Room 330E, University of Florida-Institute of Food and Agricultural Sciences, Gainesville 32610, U.S.A.

Funding

Control of Symbiotic Gene Expression in Sinorhizobium melilotiR01GM093628 · NIGMS · STANFORD UNIVERSITY · PI LONG, SHARON R · 2010 to 2017
$7.0M
NIGMS NIH HHS GM069342NIGMS NIH HHS R01 GM093628
6 · The paper itself

Abstract

The RNA-binding protein Hfq is a global regulator which controls diverse cellular processes in bacteria. To begin understanding the role of Hfq in the Sinorhizobium meliloti-Medicago truncatula nitrogen-fixing symbiosis, we defined free-living and symbiotic phenotypes of an hfq mutant. Over 500 transcripts were differentially accumulated in the hfq mutant of S. meliloti Rm1021 when grown in a shaking culture. Consistent with transcriptome-wide changes, the hfq mutant displayed dramatic alterations in metabolism of nitrogen-containing compounds, even though its carbon source utilization profiles were nearly identical to the wild type. The hfq mutant had reduced motility and was impaired for growth at alkaline pH. A deletion of hfq resulted in a reduced symbiotic efficiency, although the mutant was still able to initiate nodule development and differentiate into bacteroids.

Indexed as

Gene Expression Regulation, BacterialHost Factor 1 ProteinHydrogen-Ion ConcentrationMedicago truncatulaPlant Root NodulationPlant RootsSinorhizobium melilotiStress, PhysiologicalSymbiosisHost Factor 1 Protein

Identifiers

PMID20192823
PMCPMC4827774

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.