Evidence map›Paper›PMID 20192809›Full record

ReviewAnnual review of immunology2010

A genomic approach to human autoimmune diseases.

Virginia Pascual, Damien Chaussabel, Jacques Banchereau

Registry-linked trialAbstract readReview
In one paragraph

Review in Annual review of immunology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01780857 (The Immune Signature of Palmoplantar Pustulosis), which is not on this map. Cited by 86 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01780857 completednot on this mapstarted 2013, after this paper: background citation

The Immune Signature of Palmoplantar Pustulosis

TypeobservationalSponsorBaylor Research InstituteRan2013 to 2014Enrolled30ConditionsPalmoplantar Pustulosis
3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Virginia PascualBaylor Institute for Immunology Research, INSERM U, Dallas, Texas 75204, USA. Virginip@baylorhealth.edu
Damien Chaussabel
Jacques Banchereau

Funding

Targeting Dendritic Cells for Enhanced Musocal ImmunityU19AI057234 · NIAID · BAYLOR RESEARCH INSTITUTE · PI ZURAWSKI, GERARD · 2003 to 2013
$49.2M
SLAM Genes-from Mouse to ManP50AR055503 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI WANDSTRAT, AMY E · 2007 to 2011
$8.3M
Scientific CoreU19AI082715 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI PASCUAL, MARIA VIRGINIA · 2009 to 2018
$6.4M
Blood Transcriptional Biomarker Profiles for Category B PathogensU01AI082110 · NIAID · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI LINSLEY, PETER S · 2009 to 2013
$6.3M
Neutrophils in Lupus PathogenesisP50AR054083 · NIAMS · BAYLOR RESEARCH INSTITUTE · PI PASCUAL, MARIA VIRGINIA · 2006 to 2010
$6.2M
Use of Microarrays to Understand Systemic ArthritisR01AR050770 · NIAMS · BAYLOR RESEARCH INSTITUTE · PI PASCUAL, MARIA VIRGINIA · 2003 to 2012
$3.1M
SUBPOPULATIONS OF HUMAN DENDRITIC CELLSR01CA078846 · NCI · BAYLOR RESEARCH INSTITUTE · PI BANCHEREAU, JACQUES F · 1999 to 2008
$2.5M
NCI NIH HHS R01 CA078846NCI NIH HHS R01-CA078846NIAID NIH HHS U01 AI082110NIAID NIH HHS U01AI082110NIAID NIH HHS U19 AI057234NIAID NIH HHS U19 AI082715NIAID NIH HHS U19-AI082715-01NIAMS NIH HHS P50 AR054083NIAMS NIH HHS P50 AR055503NIAMS NIH HHS R01 AR050770PHS HHS ARO54083-01CORTPHS HHS ARO55503-01CORTPHS HHS U19-A1057234
6 · The paper itself

Abstract

The past decade has seen an explosion in the use of DNA-based microarrays. These techniques permit assessment of RNA abundance on a genome-wide scale. Medical applications emerged in the field of cancer, with studies of both solid tumors and hematological malignancies leading to the development of tests that are now used to personalize therapeutic options. Microarrays have also been used to analyze the blood transcriptome in a wide range of diseases. In human autoimmune diseases, these studies are showing potential for identifying therapeutic targets as well as biomarkers for diagnosis, assessment of disease activity, and response to treatment. More quantitative and sensitive high-throughput RNA profiling methods are starting to be available and will be necessary for transcriptome analyses to become routine tests in the clinical setting. We expect this to crystallize within the coming decade, as these methods become part of the personalized medicine armamentarium.

Indexed as

AnimalsAutoimmune DiseasesBiomarkersGenomicsHigh-Throughput Screening AssaysHumansOligonucleotide Array Sequence AnalysisBiomarkers

Identifiers

PMID20192809
PMCPMC2847838

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.