Evidence map›Paper›PMID 20186858›Full record

ArticleAnnals of neurology2010

Interferon-stimulated gene 15 (ISG15) conjugates proteins in dermatomyositis muscle with perifascicular atrophy.

Mohammad Salajegheh, Sek Won Kong, Jack L Pinkus, Ronan J Walsh, Anne Liao, Remedios Nazareno, Anthony A Amato, Bryan Krastins, Chris Morehouse, Brandon W Higgs and 5 more

Open access · greenAbstract read
In one paragraph

Article in Annals of neurology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 190 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Review
  4. Emerging therapies in idiopathic inflammatory myopathies.Journal of neuromuscular diseases · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. When ISG15 is involved in inflammation.Frontiers in immunology · 2026
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. The complement system in autoimmune diseases: pathogenesis, diagnostic markers, and therapeutic strategies.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
    Review
  17. Article
  18. Article
  19. Article
  20. Pathological autoantibody internalisation in myositis.Annals of the rheumatic diseases · 2024
    Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Mohammad SalajeghehChildren's Hospital Informatics Program, Division of Neuromuscular Disease, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Sek Won Kong
Jack L Pinkus
Ronan J Walsh
Anne Liao
Remedios Nazareno
Anthony A Amato
Bryan Krastins
Chris Morehouse
Brandon W Higgs
Bahija Jallal
Yihong Yao
David A Sarracino
Kenneth C Parker
Steven A Greenberg
Brigham and Women's Hospital · USHarvard University · USCenter for Human Genetics · US

Funding

Progenitor Cells inHuman Skeletal MuscleP01NS040828 · NINDS · CHILDREN'S HOSPITAL BOSTON · PI KUNKEL, LOUIS M · 2001 to 2007
$8.6M
Progenitor Cells inHuman Skeletal MuscleP50NS040828 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI KOHANE, ISAAC S. · 2008 to 2011
$5.9M
Gene Expression in Inflammatory MyopathiesR01NS043471 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI GREENBERG, STEVEN A · 2003 to 2005
$1.1M
Proteomic Studies in Inclusion Body MyositisR21NS057225 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI GREENBERG, STEVEN A · 2008 to 2009
$433k
NINDS NIH HHS NS40828NINDS NIH HHS P01 NS040828NINDS NIH HHS P50 NS040828NINDS NIH HHS R01 NS043471NINDS NIH HHS R01NS43471NINDS NIH HHS R21 NS057225NINDS NIH HHS R21NS057225
6 · The paper itself

Abstract

objectiveWe investigated interferon-stimulated gene 15 (ISG15), a poorly understood ubiquitin-like modifier, and its enzymatic pathway in dermatomyositis (DM), an autoimmune disease primarily involving muscle and skin.

methodsWe generated microarray data measuring transcript abundance for approximately 18,000 genes in each of 113 human muscle biopsy specimens, and studied biopsy specimens and cultured skeletal muscle using immunohistochemistry, immunoblotting proteomics, real-time quantitative polymerase chain reaction, and laser-capture microdissection.

resultsTranscripts encoding ISG15-conjugation pathway proteins were markedly upregulated in DM with perifascicular atrophy (DM-PFA) muscle (ISG15 339-fold, HERC5 62-fold, and USP18 68-fold) compared with 99 non-DM samples. Combined analysis with publicly available microarray datasets showed that >50-fold ISG15 transcript elevation had 100% sensitivity and specificity for 28 biopsies from adult DM-PFA and juvenile DM patients compared with 199 muscle samples from other muscle diseases. Free ISG15 and ISG15-conjugated proteins were only found on immunoblots from DM-PFA muscle. Cultured human skeletal muscle exposed to type 1 interferons produced similar transcripts and ISG15 protein and conjugates. Laser-capture microdissection followed by proteomic analysis showed deficiency of titin in DM perifascicular atrophic myofibers.

interpretationA large-scale microarray study of muscle samples demonstrated that among a diverse group of muscle diseases DM was uniquely associated with upregulation of the ISG15 conjugation pathway. Exposure of human skeletal muscle cell culture to type 1 interferons produced a molecular picture highly similar to that seen in human DM muscle. Perifascicular atrophic myofibers in DM were deficient in a number of skeletal muscle proteins including titin.

Indexed as

Cells, CulturedConnectinCytokinesDatabases, GeneticDermatomyositisHumansImmunoblottingImmunohistochemistryInterferon Type ILasersMicrodissectionMuscle ProteinsMuscle, SkeletalMuscular DiseasesOligonucleotide Array Sequence AnalysisPolymerase Chain ReactionConnectinCytokinesInterferon Type IISG15 protein, humanMuscle ProteinsProtein KinasesTTN protein, humanUbiquitins

Identifiers

PMID20186858
PMCPMC2875060
OpenAlexW2107032021

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.