Evidence map›Paper›PMID 20185798›Full record

ArticleCirculation research2010

Id3 is a novel atheroprotective factor containing a functionally significant single-nucleotide polymorphism associated with intima-media thickness in humans.

Amanda C Doran, Allison B Lehtinen, Nahum Meller, Michael J Lipinski, R Parker Slayton, Stephanie N Oldham, Marcus D Skaflen, Joseph Yeboah, Stephen S Rich, Donald W Bowden and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Circulation research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 52 citations in OpenAlex.

  1. The role of Id genes on pulmonary hypertension development in left heart failure.American heart journal plus : cardiology research and practice · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 2 countries.

Amanda C DoranCardiovascular Research Center, University of Virginia, Charlottesville, VA 22908, USA.
Allison B Lehtinen
Nahum Meller
Michael J Lipinski
R Parker Slayton
Stephanie N Oldham
Marcus D Skaflen
Joseph Yeboah
Stephen S Rich
Donald W Bowden
Coleen A McNamara
I.R.C.C.S. Oasi Maria SS · IT

Funding

WORKER PROTECTION AGAINST AIRBORNE INFLUENZA - A PILOT STUDYM01RR007122 · NCRR · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HUNDLEY, WILLIAM GREGORY · 1992 to 2010
$35.2M
ROLE OF LIPOXYGENASES IN ATHEROGENESIS IN DIABETES MELLITUSP01HL055798 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HEDRICK, CATHERINE C · 1995 to 2016
$28.4M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007267 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GARCIA-BLANCO, MARIANO A. · 1985 to 2024
$13.4M
Epidemiology of cardiovascular disease in diabetesR01HL067348 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI BOWDEN, DONALD W · 2001 to 2004
$4.3M
Local B-1 Regulation of AtherosclerosisR01HL136098 · NHLBI · UNIVERSITY OF VIRGINIA · PI MCNAMARA, COLEEN A · 2017 to 2020
$3.1M
Vascular Biology ResearchT32HL007355 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI MCNAMARA, COLEEN A · 1985 to 2009
$2.6M
ID3 REGULATION OF SMOOTH MUSCLE CELL PROLIFERATIONR01HL062522 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI MCNAMARA, COLEEN A · 1999 to 2008
$2.1M
Genetic Epidemiology of Vascular Calcified PlaqueF32HL085989 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI LEHTINEN, ALLISON · 2006 to 2008
$69k
NCRR NIH HHS M01 RR007122NCRR NIH HHS M01 RR07122NHLBI NIH HHS 5-T32 HL007355-29NHLBI NIH HHS F32 HL085989NHLBI NIH HHS P01 HL055798NHLBI NIH HHS P01 HL55798NHLBI NIH HHS R01 HL062522NHLBI NIH HHS R01 HL067348NHLBI NIH HHS R01 HL136098NHLBI NIH HHS R01 HL62522NHLBI NIH HHS R01 HL67348NHLBI NIH HHS T32 HL007355
6 · The paper itself

Abstract

rationaleThe gene encoding the helix-loop-helix transcription factor Id3 (inhibitor of differentiation-3) is located within atherosclerosis susceptibility loci of both mice and humans, yet its influence on atherosclerosis is not known.

objectiveThe present study sought to determine whether polymorphisms in the ID3 gene were associated with indices of atherosclerosis in humans and if loss of Id3 function modulated atherogenesis in mice. METHODS AND

resultsSix tagging single-nucleotide polymorphisms (SNPs) (tagSNPs) in the human ID3 gene were assessed in participants of the Diabetes Heart Study. One tagSNP, rs11574, was independently associated with carotid intima-media thickness (IMT). The human ID3 variant at rs11574 results in an alanine to threonine substitution in the C terminus. To determine the effect of this polymorphism on the basic function of Id3, site-directed mutagenesis of the human ID3 gene at rs11574 was performed. Results demonstrated a significant reduction in coimmunoprecipitation of the known E-protein partner, E12, with Id3 when it contains the sequence encoded by the risk allele (Id3105T). Further, Id3105T had an attenuated ability to modulate E12-mediated transcriptional activation compared to Id3 containing the ancestral allele (Id3105A). Microarray analysis of vascular smooth muscle cells from WT and Id3(-/-) mice revealed significant modulation of multiple gene pathways implicated in atherogenesis. Moreover, Id3(-/-)ApoE(-/-) mice developed significantly more atherosclerosis in response to 32 weeks of Chow or Western diet feeding than Id3(+/+)ApoE(-/-) mice.

conclusionsTaken together, results provide novel evidence that Id3 is an atheroprotective factor and link a common SNP in the human ID3 gene to loss of Id3 function and increased IMT.

Indexed as

Polymorphism, Single NucleotideAgedAnimalsApolipoproteins EBasic Helix-Loop-Helix ProteinsCarotid ArteriesCarotid Artery DiseasesDiabetes Mellitus, Type 2Disease Models, AnimalFemaleGene Expression ProfilingGene Expression RegulationGene FrequencyGenetic Predisposition to DiseaseHumansImmunoprecipitationApolipoproteins EBasic Helix-Loop-Helix ProteinsID3 protein, humanIdb3 protein, mouseInhibitor of Differentiation ProteinsNeoplasm Proteins

Identifiers

PMID20185798
PMCPMC2860382
OpenAlexW2107327653

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.