Evidence map›Paper›PMID 20181739›Full record

ArticleRNA (New York, N.Y.)2010

LSm1-7 complexes bind to specific sites in viral RNA genomes and regulate their translation and replication.

Rui Pedro Galão, Ashwin Chari, Isabel Alves-Rodrigues, Daniela Lobão, Antonio Mas, Christian Kambach, Utz Fischer, Juana Díez

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Rui Pedro GalãoDepartment of Experimental and Health Sciences, Universitat Pompeu Fabra, 08003 Barcelona, Spain.
Ashwin Chari
Isabel Alves-Rodrigues
Daniela Lobão
Antonio Mas
Christian Kambach
Utz Fischer
Juana Díez
Universitat Pompeu Fabra · ESUniversity of Würzburg · DEPaul Scherrer Institute · CHUniversity of Castilla-La Mancha · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LSm1-7 complexes promote cellular mRNA degradation, in addition to translation and replication of positive-strand RNA viruses such as the Brome mosaic virus (BMV). Yet, how LSm1-7 complexes act on their targets remains elusive. Here, we report that reconstituted recombinant LSm1-7 complexes directly bind to two distinct RNA-target sequences in the BMV genome, a tRNA-like structure at the 3'-untranslated region and two internal A-rich single-stranded regions. Importantly, in vivo analysis shows that these sequences regulate the translation and replication of the BMV genome. Furthermore, both RNA-target sequences resemble those found for Hfq, the LSm counterpart in bacteria, suggesting conservation through evolution. Our results provide the first evidence that LSm1-7 complexes interact directly with viral RNA genomes and open new perspectives in the understanding of LSm1-7 functions.

Indexed as

Genome, ViralProtein Biosynthesis3' Untranslated RegionsBinding SitesBromovirusRNA-Binding ProteinsRNA Cap-Binding ProteinsRNA, MessengerRNA, ViralSaccharomyces cerevisiae ProteinsVirus AssemblyVirus Replication3' Untranslated RegionsLSM1 protein, S cerevisiaeLSM7 protein, S cerevisiaeRNA-Binding ProteinsRNA Cap-Binding ProteinsRNA, MessengerRNA, ViralSaccharomyces cerevisiae Proteins

Identifiers

PMID20181739
PMCPMC2844628
OpenAlexW2126565462

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.