Evidence map›Paper›PMID 20180097›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010

Genetic structure among sorghum landraces as revealed by morphological variation and microsatellite markers in three agroclimatic regions of Burkina Faso.

Clarisse Barro-Kondombo, Fabrice Sagnard, Jacques Chantereau, Monique Deu, Kirsten Vom Brocke, Patrick Durand, Eric Gozé, Jean Didier Zongo

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

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18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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  14. Assessment of genetic diversity in the sorghum reference set using EST-SSR markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Clarisse Barro-KondomboINERA, CRREA du Centre, BP 10, Koudougou, Burkina Faso.
Fabrice Sagnard
Jacques Chantereau
Monique Deu
Kirsten Vom Brocke
Patrick Durand
Eric Gozé
Jean Didier Zongo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diversity among 124 sorghum landraces from 10 villages surveyed in 3 regions of Burkina Faso covering different agroecological zones was assessed by 28 agromorphological traits and 29 microsatellite markers. 94.4% of the landraces collected belonged to the botanical race guinea (consisting of 96.6% guinea gambicum and 3.4% guinea margaritiferum), 74.2% had white kernels, 13.7% had orange and 12.1% had red kernels. Compared to the "village nested within zone" factor, the "variety nested within village within zone" factor predominately contributed to the diversity pattern for all nine statistically analysed quantitative traits. The multivariate analyses performed on ten morphological traits identified five landrace groups, and of these, the red kernel sorghum types appeared the most homogenous. 2 to 17 alleles were detected per locus with a mean 4.9 alleles per locus and a gene diversity (He) of 0.37. Landraces from the sub-Sahelian zone had the highest gene diversity (He = 0.38). Cluster analysis revealed that the diversity was weakly stratified and could not be explained by any biophysical criteria. One homogenous guinea margaritiferum group was distinguished from other guinea landraces. The red kernel type appeared to be genetically distinct from all other guinea landraces. The kernel colour was the principal structuring factor. This is an example of a homogeneous group of varieties selected for a specific use (for local beer preparation), mainly grown around the households in compound fields, and presenting particular agromorphological and genetic traits. This is the most original feature of sorghum diversity in Burkina Faso and should be the focus of special conservation efforts.

Indexed as

AllelesBurkina FasoClimateCluster AnalysisDNA, PlantGenetic MarkersGenetic VariationGenotypeGeographyMicrosatellite RepeatsModels, GeneticPhylogenySorghumSpecies SpecificityDNA, PlantGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.