Evidence map›Paper›PMID 20179969›Full record

ArticleMolecular genetics and genomics : MGG2010

Regulation of gene expression by chromosome 5A during cold hardening in wheat.

Gábor Kocsy, Benedikt Athmer, Dragan Perovic, Axel Himmelbach, Attila Szucs, Ildikó Vashegyi, Patrick Schweizer, Gábor Galiba, Nils Stein

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Article in Molecular genetics and genomics : MGG, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  10. The expression ofBiotechnology, biotechnological equipment · 2014
    Article
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  12. Large deletions in the CBF gene cluster at the Fr-B2 locus are associated with reduced frost tolerance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors.

Gábor KocsyAgricultural Research Institute of the Hungarian Academy of Sciences, Brunszvik u. 2, Martonvásár, 2462, Hungary.
Benedikt Athmer
Dragan Perovic
Axel Himmelbach
Attila Szucs
Ildikó Vashegyi
Patrick Schweizer
Gábor Galiba
Nils Stein

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cold hardening is necessary to achieve the genetically determined maximum freezing tolerance and to reduce yield losses in winter cereals. The aim of the present study was to determine a set of genes with an important role in this process, by comparing of chromosome 5A substitution lines with different levels of freezing tolerance, since chromosome 5A is a major regulator of this trait. During 21 days of treatment at 2 degrees C, 303 genes were up-regulated, while 222 were down-regulated at most sampling points, and 156 at around half of them (out of the 10,297 unigenes studied). The freezing-tolerant substitution line exhibited 1.5 times as many differentially expressed genes than the sensitive one. The transcription of 78 genes (39 up-regulated) proved to be chromosome 5A-dependent. These genes encoded proteins involved in transcriptional regulation, defence processes and carbohydrate metabolism. Three of the chromosome 5A-related genes, coding for a cold-responsive, a Ca-binding and an embryo and meristem-related protein, were genetically mapped and characterized in further detail. The present experimental system was appropriate for the selection of chromosome 5A-related genes involved in short- and long-term cold acclimation in wheat. By modifying the expression of these genes it may be possible to improve freezing tolerance.

Indexed as

Chromosomes, PlantCold TemperatureGene Expression Regulation, PlantHardnessGene Expression ProfilingMultigene FamilyTranscription, GeneticTriticum

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.