Evidence map›Paper›PMID 20179151›Full record

ReviewMolecular cancer research : MCR2010

Nonsense-mediated RNA decay regulation by cellular stress: implications for tumorigenesis.

Lawrence B Gardner

Open access · bronzeAbstract readReview
In one paragraph

Review in Molecular cancer research : MCR, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 149 citations in OpenAlex.

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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Lawrence B GardnerDivision of Hematology, Department of Medicine, New York University School of Medicine, New York, NY 10016, USA. Lawrence.gardner@nyumc.org
New York University · US

Funding

RESEARCH IN THE PATHOGENESIS OF HEMATOLOGIC DISORDERST32HL007151 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI AL-HOMSI, AHMAD SAMER · 1988 to 2018
$5.9M
Nonsense Mediated RNA Decay Regulation in Erythropoiesis & ThalassemiaR01DK081641 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GARDNER, LAWRENCE BENJAMIN · 2008 to 2014
$1.9M
NHLBI NIH HHS T32 HL007151NIDDK NIH HHS R01DK08164NIDDK NIH HHS R01 DK081641
6 · The paper itself

Abstract

Nonsense-mediated RNA decay (NMD) has long been viewed as an important constitutive mechanism to rapidly eliminate mutated mRNAs. More recently, it has been appreciated that NMD also degrades multiple nonmutated transcripts and that NMD can be regulated by wide variety of cellular stresses. Many of the stresses that inhibit NMD, including cellular hypoxia and amino acid deprivation, are experienced in cells exposed to hostile microenvironments, and several NMD-targeted transcripts promote cellular adaptation in response to these environmental stresses. Because adaptation to the microenvironment is crucial in tumorigenesis, and because NMD targets many mutated tumor suppressor gene transcripts, the regulation of NMD may have particularly important implications in cancer. This review briefly outlines the mechanisms by which transcripts are identified and targeted by NMD and reviews the evidence showing that NMD is a regulated process that can dynamically alter gene expression. Although much of the focus in NMD research has been in identifying the proteins that play a role in NMD and identifying NMD-targeted transcripts, recent data about the potential functional significance of NMD regulation, including the stabilization of alternatively spliced mRNA isoforms, the validation of mRNAs as bona fide NMD targets, and the role of NMD in tumorigenesis, are explored.

Indexed as

Alternative SplicingAnimalsCell Transformation, NeoplasticCodon, NonsenseGene Expression Regulation, NeoplasticHumansProtein IsoformsRNA, MessengerRNA StabilityStress, PhysiologicalCodon, NonsenseProtein IsoformsRNA, Messenger

Identifiers

PMID20179151
PMCPMC2841721
OpenAlexW2112457531

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.