Evidence map›Paper›PMID 20178842›Full record

ArticleExperimental gerontology2010

Gene regulatory changes in yeast during life extension by nutrient limitation.

Jinqing Wang, James C Jiang, S Michal Jazwinski

Abstract read
In one paragraph

Article in Experimental gerontology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Some Metabolites Act as Second Messengers in Yeast Chronological Aging.International journal of molecular sciences · 2018
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jinqing WangDepartment of Medicine and the Tulane Center for Aging, Tulane University Health Sciences Center, 1430 Tulane Avenue, New Orleans, LA 70112, USA.
James C Jiang
S Michal Jazwinski

Funding

CELLULAR AGING IN A YEAST MODEL SYSTEMR37AG006168 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 1994 to 2016
$5.0M
NUTRITIONAL AND METABOLIC MECHANISMS OF AGINGR01AG017887 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 2000 to 2006
$1.8M
NIA NIH HHS R01 AG017887NIA NIH HHS R37 AG006168
6 · The paper itself

Abstract

Genetic analyses aimed at identification of the pathways and downstream effectors of calorie restriction (CR) in the yeast Saccharomyces cerevisiae suggest the importance of central metabolism for the extension of replicative life span by CR. However, the limited gene expression studies to date are not informative, because they have been conducted using cells grown in batch culture which markedly departs from the conditions under which yeasts are grown during life span determinations. In this study, we have examined the gene expression changes that occur during either glucose limitation or elimination of nonessential-amino acids, both of which enhance yeast longevity, culturing cells in a chemostat at equilibrium, which closely mimics conditions they encounter during life span determinations. Expression of 59 genes was examined quantitatively by real-time, reverse transcriptase polymerase chain reaction (qRT-PCR), and the physiological state of the cultures was monitored. Extensive gene expression changes were detected, some of which were common to both CR regimes. The most striking of these was the induction of tricarboxylic acid (TCA) cycle and retrograde response target genes, which appears to be at least partially due to the up-regulation of the HAP4 gene. These gene regulatory events portend an increase in the generation of biosynthetic intermediates necessary for the production of daughter cells, which is the measure of yeast replicative life span.

Indexed as

Amino AcidsCCAAT-Binding FactorCitric Acid CycleCulture MediaGene Expression Regulation, DevelopmentalGene Expression Regulation, FungalGenes, FungalGluconeogenesisGlucoseGlycogenGlycolysisGlyoxylatesModels, BiologicalMonosaccharide Transport ProteinsNitrogenPentose Phosphate PathwayAmino AcidsCCAAT-Binding FactorCulture MediaGlucoseGlycogenGlyoxylatesglyoxylic acidHAP4 protein, S cerevisiaeMonosaccharide Transport ProteinsNitrogenPyruvic AcidSaccharomyces cerevisiae ProteinsTrehalose

Identifiers

PMID20178842
PMCPMC2879456

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.