Evidence map›Paper›PMID 20177421›Full record

Trial reportThe pharmacogenomics journal2011

In silico and in vitro pharmacogenetics: aldehyde oxidase rapidly metabolizes a p38 kinase inhibitor.

X Zhang, H-H Liu, P Weller, M Zheng, W Tao, J Wang, G Liao, M Monshouwer, G Peltz

Abstract readClinical Trial, Phase IRandomized Controlled Trial
PubMed Publisher
In one paragraph

Trial report in The pharmacogenomics journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 86 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Enzyme Kinetics, Pharmacokinetics, and Inhibition of Aldehyde Oxidase.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Fast Methods for Prediction of Aldehyde Oxidase-Mediated Site-of-Metabolism.Computational and structural biotechnology journal · 2019
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Pyrido[3,4-d]pyrimidin-4(3H)-one metabolism mediated by aldehyde oxidase is blocked by C2-substitution.Xenobiotica; the fate of foreign compounds in biological systems · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

X ZhangDepartment of Genetics and Genomics, Roche Palo Alto, Palo Alto, CA, USA.
H-H Liu
P Weller
M Zheng
W Tao
J Wang
G Liao
M Monshouwer
G Peltz
Stanford University · US

Funding

Pharmacogenetic Analysis in MiceR01GM068885 · NIGMS · ROCHE PALO ALTO, LLC · PI PELTZ, GARY A · 2004 to 2006
$860k
Pharmacogenetic Analysis in Mice (II)R56GM068885 · NIGMS · STANFORD UNIVERSITY · PI PELTZ, GARY A · 2007 to 2007
$460k
NIGMS NIH HHS 756 GM068885-05
6 · The paper itself

Abstract

The clinical development of a candidate p38 kinase inhibitor was terminated because of its unexpectedly rapid clearance in human subjects. Its short half-life and metabolic profile in human beings were vastly different from that in rats, dogs, and monkeys characterized during routine pre-clinical studies. Mice generated the predominant drug (4-hydroxylated) metabolite produced in human beings, which was not found in other species. The data from a murine in vitro drug biotransformation assay that used liver extracts from 14 inbred mouse strains were analyzed by haplotype-based computational genetic analysis. This led to the identification of aldehyde oxidase-1 (AOX1) as the enzyme responsible for the rapid metabolism of this drug. Specific enzyme inhibitors and expressed recombinant enzymes were used to confirm that AOX catalyzed the formation of the 4-hydroxylated drug metabolite in mouse and man. Genetic variation within Aox1 regulated the level of hepatic Aox1 mRNA, AOX1 protein, and enzyme activity among the inbred strains. Thus, computational murine pharmacogenetic analysis can facilitate the identification and characterization of drug metabolism pathways that are differentially utilized by humans and other species.

Indexed as

AdolescentAdultAldehyde OxidaseAnimalsArthritis, RheumatoidDogsFemaleHalf-LifeHaplorhiniHumansLiverMaleMiceMice, Inbred Strainsp38 Mitogen-Activated Protein KinasesPharmacogeneticsAldehyde OxidaseAOX1 protein, humanAox1 protein, mousep38 Mitogen-Activated Protein KinasesProtein Kinase InhibitorsPyrimidinones

Identifiers

PMID20177421
OpenAlexW2043723116

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.