Evidence map›Paper›PMID 20176971›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Multiple translational products from a five-nucleotide ribozyme.

Rebecca M Turk, Nataliya V Chumachenko, Michael Yarus

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 155 citations in OpenAlex.

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  13. Article
  14. Coevolution of reproducers and replicators at the origin of life and the conditions for the origin of genomes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Enzyme-Free Copying of 12 Bases of RNA with Dinucleotides.Angewandte Chemie (International ed. in English) · 2022
    Article
  16. Article
  17. Genome Evolution from Random Ligation of RNAs of Autocatalytic Sets.International journal of molecular sciences · 2021
    Article
  18. Article
  19. Single-round deoxyribozyme discovery.Nucleic acids research · 2021
    Article
  20. Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Rebecca M TurkDepartment of Molecular, Cooperative Institute for Research in Environmental Sciences, University of Colorado, Boulder, CO 80309-0347, USA.
Nataliya V Chumachenko
Michael Yarus
Institut thématique Génétique, génomique et bioinformatique · FRUniversity of Colorado Boulder · US

Funding

RNA CATALYSIS OF TRANSLATIONAL REACTIONSR01GM048080 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI YARUS, MICHAEL J · 1993 to 2009
$2.8M
NIGMS NIH HHS R01 GM048080NIGMS NIH HHS R01 GM 48080
6 · The paper itself

Abstract

An indispensable step in protein biosynthesis is the 2(')(3(')) aminoacylation of tRNA by aminoacyl-tRNA synthetases. Here we show that a similar activity exists in a tiny, 5-nt-long RNA enzyme with a 3-nt active center. The small ribozyme initially trans-phenylalanylates a partially complementary 4-nt RNA selectively at its terminal 2(')-ribose hydroxyl using PheAMP, the natural form for activated amino acid. The initial 2(') Phe-RNA product can be elaborated into multiple peptidyl-RNAs. Reactions do not require divalent cations, and have limited dependence on monovalent cations. Small size and minimal requirements for regiospecific translational activity strongly support the hypothesis that minuscule RNA enzymes participated in early forms of translation.

Indexed as

Protein BiosynthesisBase SequenceCatalysisKineticsMass SpectrometryModels, MolecularMolecular StructureNucleic Acid ConformationNucleotidesRNARNA, CatalyticRNA, Transfer, PheSubstrate SpecificityTransfer RNA AminoacylationNucleotidesRNARNA, CatalyticRNA, Transfer, Phe

Identifiers

PMID20176971
PMCPMC2826339
OpenAlexW2097459096

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.