Evidence map›Paper›PMID 20176963›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Appropriate maturation and folding of 16S rRNA during 30S subunit biogenesis are critical for translational fidelity.

Biswajoy Roy-Chaudhuri, Narayanaswamy Kirthi, Gloria M Culver

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Article
  2. Mechanistic insights intobioRxiv : the preprint server for biology · 2026
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  6. Lamotrigine-mediated rescue of RsgA-deficientJournal of bacteriology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Biswajoy Roy-ChaudhuriDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Narayanaswamy Kirthi
Gloria M Culver

Funding

Assemblying an Understanding of Ribosome BiosynthesisR01GM062432 · NIGMS · UNIVERSITY OF ROCHESTER · PI CULVER, GLORIA M · 2001 to 2018
$5.0M
NIGMS NIH HHS GM062432NIGMS NIH HHS R01 GM062432
6 · The paper itself

Abstract

Ribosomal protein S5 is critical for small ribosomal subunit (SSU) assembly and is indispensable for SSU function. Previously, we identified a point mutation in S5, (G28D) that alters both SSU formation and translational fidelity in vivo, which is unprecedented for other characterized S5 mutations. Surprisingly, additional copies of an extraribosomal assembly factor, RimJ, rescued all the phenotypes associated with S5(G28D), including fidelity defects, suggesting that the effect of RimJ on rescuing the miscoding of S5(G28D) is indirect. To understand the underlying mechanism, we focused on the biogenesis cascade and observed defects in processing of precursor 16S (p16S) rRNA in the S5(G28D) strain, which were rescued by RimJ. Analyses of p16S rRNA-containing ribosomes from other strains further supported a correspondence between the extent of 5(') end maturation of 16S rRNA and translational miscoding. Chemical probing of mutant ribosomes with additional leader sequences at the 5(') end of 16S rRNA compared to WT ribosomes revealed structural differences in the region of helix 1. Thus, the presence of additional nucleotides at the 5(') end of 16S rRNA could alter fidelity by changing the architecture of 16S rRNA in translating ribosomes and suggests that fidelity is governed by accuracy and completeness of the SSU biogenesis cascade.

Indexed as

Nucleic Acid ConformationProtein BiosynthesisAcetyltransferasesEscherichia coliEscherichia coli ProteinsModels, MolecularMutation, MissenseProtein ConformationRibosomal ProteinsRibosome Subunits, Small, BacterialRNA, Ribosomal, 16SAcetyltransferasesEscherichia coli ProteinsRibosomal Proteinsribosomal protein S5RimJ protein, E coliRNA, Ribosomal, 16S

Identifiers

PMID20176963
PMCPMC2842029

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.