Evidence map›Paper›PMID 20176111›Full record

ArticleJournal of structural biology2010

12 Arylstibonic acids that inhibit the DNA binding of five B-ZIP dimers.

Vikas Rishi, Won-Jun Oh, Sarah L Heyerdahl, Jianfei Zhao, Dominic Scudiero, Robert H Shoemaker, Charles Vinson

Open access · greenAbstract read
In one paragraph

Article in Journal of structural biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. What turns CREB on? And off? And why does it matter?Cellular and molecular life sciences : CMLS · 2020
    Review
  3. Article
  4. Review
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Vikas RishiLaboratory of Metabolism, National Cancer Institute, National Institutes of Health, Building 37, Room 3128, Bethesda, MD 20892, USA.
Won-Jun Oh
Sarah L Heyerdahl
Jianfei Zhao
Dominic Scudiero
Robert H Shoemaker
Charles Vinson
National Cancer Institute · USNational Institutes of Health · USScience Applications International Corporation (United States) · US

Funding

Gene Regulation and Function: The B-ZIP ProteinsZIABC005271 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI VINSON, CHARLES · 2009 to 2019
$11.2M
GENE REGULATION AND FUNCTION: THE B-ZIP PROTEINSZ01BC005271 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI VINSON, CHARLES · 1996 to 2008
$2.0M
Intramural NIH HHS Z01 BC005271
6 · The paper itself

Abstract

Previously, we identified an arylstibonic acid, NSC13778 that specifically binds to the basic region of the C/EBPalpha B-ZIP domain and disrupts DNA binding. We now examine a panel of 14 additional arylstibonic acid derivatives of NSC13778 for their ability to inhibit the DNA binding of five B-ZIP dimers (c-Fos|JunD, VBP, C/EBPalpha, C/EBPbeta, and CREB). They show various specificities at inhibiting the DNA binding of five B-ZIP domains. NSC13746 inhibits the DNA binding of C/EBPbeta and CREB at 100nM and promiscuously inhibiting the DNA binding of all five proteins in the 1muM range. Dialysis experiments indicate that NSC 13746 binding to the B-ZIP domain is reversible. Thermal denaturation studies indicate that NSC13746 binds the B-ZIP domain. Some compounds specifically inhibit DNA binding, with VBP and c-Fos|JunD being most easily disrupted. These compounds inhibit, with similar specificities to the pure B-ZIP domains, the DNA binding of nuclear extract to the AP1 DNA sequence but no inhibition is observed to SP1 containing oligonucleotide. Transient transfection assays indicate that NSC13746 can inhibit the TPA induced activation of two B-ZIP dependent reporters. These experiments suggest that arylstibonic acids are promising leads for inhibiting the DNA binding of a group of B-ZIP proteins in cells.

Indexed as

AcidsProtein ConformationAmino Acid SequenceAnimalsAntimonyCinnamatesCyclic AMP Response Element-Binding ProteinDNADNA-Binding ProteinsMiceMolecular Sequence DataMolecular StructureProtein DenaturationProtein MultimerizationAcidsAntimonyCinnamatesCyclic AMP Response Element-Binding ProteinDNADNA-Binding ProteinsNSC 13778

Identifiers

PMID20176111
PMCPMC7377350
OpenAlexW2054727927

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.