Evidence map›Paper›PMID 20175559›Full record

ArticleACS chemical biology2010

Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates.

Joseph P Noel, Nikki Dellas, Juan A Faraldos, Marylin Zhao, B Andes Hess, Lidia Smentek, Robert M Coates, Paul E O'Maille

Abstract read
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Article in ACS chemical biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

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25citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Joseph P NoelHoward Hughes Medical Institute, USA.
Nikki Dellas
Juan A Faraldos
Marylin Zhao
B Andes Hess
Lidia Smentek
Robert M Coates
Paul E O'Maille

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Sesquiterpene skeletal complexity in nature originates from the enzyme-catalyzed ionization of (trans,trans)-farnesyl diphosphate (FPP) (1a) and subsequent cyclization along either 2,3-transoid or 2,3-cisoid farnesyl cation pathways. Tobacco 5-epi-aristolochene synthase (TEAS), a transoid synthase, produces cisoid products as a component of its minor product spectrum. To investigate the cryptic cisoid cyclization pathway in TEAS, we employed (cis,trans)-FPP (1b) as an alternative substrate. Strikingly, TEAS was catalytically robust in the enzymatic conversion of (cis,trans)-FPP (1b) to exclusively (>/=99.5%) cisoid products. Further, crystallographic characterization of wild-type TEAS and a catalytically promiscuous mutant (M4 TEAS) with 2-fluoro analogues of both all-trans FPP (1a) and (cis,trans)-FPP (1b) revealed binding modes consistent with preorganization of the farnesyl chain. These results provide a structural glimpse into both cisoid and transoid cyclization pathways efficiently templated by a single enzyme active site, consistent with the recently elucidated stereochemistry of the cisoid products. Further, computational studies using density functional theory calculations reveal concerted, highly asynchronous cyclization pathways leading to the major cisoid cyclization products. The implications of these discoveries for expanded sesquiterpene diversity in nature are discussed.

Indexed as

Alkyl and Aryl TransferasesCrystallography, X-RayCyclizationModels, MolecularMutationNicotianaPolyisoprenyl PhosphatesSesquiterpenesStereoisomerismSubstrate Specificity2-fluorofarnesyl diphosphate5-epi-aristolochene synthaseAlkyl and Aryl TransferasesPolyisoprenyl PhosphatesSesquiterpenes

Identifiers

PMID20175559
PMCPMC2860371

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.