Evidence map›Paper›PMID 20173059›Full record

ArticleApplied and environmental microbiology2010

Role of GlnR in acid-mediated repression of genes encoding proteins involved in glutamine and glutamate metabolism in Streptococcus mutans.

Pei-Min Chen, Yi-Ywan M Chen, Sung-Liang Yu, Singh Sher, Chern-Hsiung Lai, Jean-San Chia

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. GlnR positively affects the acid resistance ofFrontiers in microbiology · 2025
    Article
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  4. Diaryl Urea Derivative Molecule Inhibits CariogenicFrontiers in cellular and infection microbiology · 2022
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  8. Article
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  10. Article
  11. Review
  12. Modification of theMicrobial genomics · 2017
    Article
  13. [Development of transcriptional regulators of Streptococcus mutans in cariogenic virulence].Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2016
    Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Pei-Min ChenDepartment of Microbiology and Graduate Institute of Microbiology, College of Medicine, National Taiwan University, No. 1 Jen Ai Road Section 1, Taipei, Taiwan 10051.
Yi-Ywan M Chen
Sung-Liang Yu
Singh Sher
Chern-Hsiung Lai
Jean-San Chia
National Taiwan University · TWChang Gung University · TWKaohsiung Medical University · TWNational Taiwan Normal University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The acid tolerance response (ATR) is one of the major virulence traits of Streptococcus mutans. In this study, the role of GlnR in acid-mediated gene repression that affects the adaptive ATR in S. mutans was investigated. Using a whole-genome microarray and in silico analyses, we demonstrated that GlnR and the GlnR box (ATGTNAN(7)TNACAT) were involved in the transcriptional repression of clusters of genes encoding proteins involved in glutamine and glutamate metabolism under acidic challenge. Reverse transcription-PCR (RT-PCR) analysis revealed that the coordinated regulation of the GlnR regulon occurred 5 min after acid treatment and that prolonged acid exposure (30 min) resulted in further reduction in expression. A lower level but consistent reduction in response to acidic pH was also observed in chemostat-grown cells, confirming the negative regulation of GlnR. The repression by GlnR through the GlnR box in response to acidic pH was further confirmed in the citBZC operon, containing genes encoding the first three enzymes in the glutamine/glutamate biosynthesis pathway. The survival rate of the GlnR-deficient mutant at pH 2.8 was more than 10-fold lower than that in the wild-type strain 45 min after acid treatment, suggesting that the GlnR regulon participates in S. mutans ATR. It is hypothesized that downregulation of the synthesis of the amino acid precursors in response to acid challenge would promote citrate metabolism to pyruvate, with the consumption of H(+) and potential ATP synthesis. Such regulation will ensure an optimal acid adaption in S. mutans.

Indexed as

Gene Expression Regulation, BacterialAcidsAdenosine TriphosphateAnti-Bacterial AgentsBacterial ProteinsCitric AcidGene DeletionGenes, BacterialGlutamic AcidGlutamineHydrogenMetabolic Networks and PathwaysMicrobial ViabilityMultigene FamilyOligonucleotide Array Sequence AnalysisPyruvic AcidAcidsAdenosine TriphosphateAnti-Bacterial AgentsBacterial ProteinsCitric AcidGlutamic AcidGlutamineHydrogenPyruvic AcidRepressor Proteins

Identifiers

PMID20173059
PMCPMC2849205
OpenAlexW2103043251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.