Evidence map›Paper›PMID 20172523›Full record

ArticleAtherosclerosis2010

Genetic variations at ABCG5/G8 genes modulate plasma lipids concentrations in patients with familial hypercholesterolemia.

A Garcia-Rios, P Perez-Martinez, F Fuentes, P Mata, J Lopez-Miranda, R Alonso, F Rodriguez, A Garcia-Olid, J Ruano, J M Ordovas and 1 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Atherosclerosis, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02693548 (The Spanish Familial Hypercholesterolaemia Cohort Study), which is not on this map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02693548 recruitingnot on this map

The Spanish Familial Hypercholesterolaemia Cohort Study

TypeobservationalSponsorFundación Hipercolesterolemia FamiliarRan2004 to 2030Enrolled4,141ConditionsFamilial Hypercholesterolaemia
3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

A Garcia-RiosReina Sofia University Hospital, Lipids and Atherosclerosis Research Unit, Instituto Maimónides de Investigación Biomédica de Córdoba (IMIBIC), University of Cordoba, Ciber Fisiopatologia Obesidad y Nutricion (CIBEROBN), Spain.
P Perez-Martinez
F Fuentes
P Mata
J Lopez-Miranda
R Alonso
F Rodriguez
A Garcia-Olid
J Ruano
J M Ordovas
F Perez-Jimenez
Instituto Maimónides de Investigación Biomédica de Córdoba · ESHospital Universitario Fundación Jiménez Díaz · ESTufts University · USUniversity of Córdoba · ESCentro de Investigación Biomédica en Red · ESHospital Universitario Reina Sofía · ES

Funding

GENE/DIET EFFECTS ON PLASMA LIPOPROTEIN LEVELSR01HL054776 · NHLBI · TUFTS UNIVERSITY BOSTON · PI ORDOVAS, JOSE M. · 1996 to 2010
$2.6M
PAT PROTEINS: GENE-DIET INTERACTIONS OBESITY RISK AND HEALTHR01DK075030 · NIDDK · TUFTS UNIVERSITY BOSTON · PI ORDOVAS, JOSE M. · 2007 to 2009
$989k
NHLBI NIH HHS R01 HL054776NIDDK NIH HHS R01 DK075030
6 · The paper itself

Abstract

objectiveTo investigate the association of four common single nucleotide polymorphisms (SNPs) at ABCG5 (i7892A>G, i18429C>T, Gln604GluC>G, i11836G>A) and five at ABCG8 (5U145T>G, Tyr54CysA>G, Asp19HisG>C, i14222T>C, and Thr400LysG>T) with plasma lipids concentrations and to explore the interaction between those SNPs and smoking in patients with FH. METHODS AND

resultsABCG5/G8 SNPs were genotyped in 500 subjects with genetic diagnosis of FH. Carriers of the minor A allele at the ABCG5_i11836G>A SNP displayed significantly higher HDL-C concentrations (P=0.023) than G/G subjects. In addition, carriers of the minor G allele at the ABCG5_Gln604GluC>G SNP had significantly lower VLDL-C (P=0.011) and lower TG (P=0.017) concentrations than homozygous C/C. Interestingly, a significant gene-smoking interaction was found, in which carriers of the minor alleles at ABCG5 (i7892A>G, i18429C>T, i11836G>A) SNPs displayed significantly lower HDL-C, higher TC and higher TG respectively, only in smokers. On the other hand, nonsmokers carriers of the minor alleles at ABCG5 (i18429C>T and Gln604GluC>G) SNPs had significantly lower TG concentrations (P=0.012 and P=0.035) compared with homozygous for the major allele.

conclusionsOur data support the notion that ABCG5/G8 genetic variants modulate plasma lipids concentrations in patients with FH and confirm that this effect could be influenced by smoking. Therefore, these results suggest that gene-environmental interactions can affect the clinical phenotype of FH.

Indexed as

Gene Expression RegulationPolymorphism, Single NucleotideAdultAllelesATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 5ATP Binding Cassette Transporter, Subfamily G, Member 8Cohort StudiesFamily HealthFemaleGenotypeHumansHypercholesterolemiaLipidsLipoproteinsMaleABCG5 protein, humanABCG8 protein, humanATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 5ATP Binding Cassette Transporter, Subfamily G, Member 8LipidsLipoproteins

Identifiers

PMID20172523
PMCPMC2905734
OpenAlexW2095059518

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.