Evidence map›Paper›PMID 20170898›Full record

ArticleAmerican journal of human genetics2010

Mutations in TPRN cause a progressive form of autosomal-recessive nonsyndromic hearing loss.

Yun Li, Esther Pohl, Redouane Boulouiz, Margit Schraders, Gudrun Nürnberg, Majida Charif, Ronald J C Admiraal, Simon von Ameln, Ingelore Baessmann, Mostafa Kandil and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 59 citations in OpenAlex.

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  14. Mutation ofJournal of medical genetics · 2018
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  18. New treatment options for hearing loss.Nature reviews. Drug discovery · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Yun LiCenter for Molecular Medicine Cologne (CMMC), University of Cologne, 50931 Cologne, Germany.
Esther Pohl
Redouane Boulouiz
Margit Schraders
Gudrun Nürnberg
Majida Charif
Ronald J C Admiraal
Simon von Ameln
Ingelore Baessmann
Mostafa Kandil
Joris A Veltman
Peter Nürnberg
Christian Kubisch
Abdelhamid Barakat
Hannie Kremer
Bernd Wollnik
University of Cologne · DECologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases · DEInstitut Pasteur du Maroc · MARadboud University Medical Center · NLRadboud University Nijmegen · NL

Funding

Action on Hearing Loss G36
6 · The paper itself

Abstract

We performed genome-wide homozygosity mapping in a large consanguineous family from Morocco and mapped the autosomal-recessive nonsyndromic hearing loss (ARNSHL) in this family to the DFNB79 locus on chromosome 9q34. By sequencing of 62 positional candidate genes of the critical region, we identified a causative homozygous 11 bp deletion, c.42_52del, in the TPRN gene in all seven affected individuals. The deletion is located in exon 1 and results in a frameshift and premature protein truncation (p.Gly15AlafsX150). Interestingly, the deleted sequence is part of a repetitive and CG-rich motive predicted to be prone to structural aberrations during crossover formation. We identified another family with progressive ARNSHL linked to this locus, whose affected members were shown to carry a causative 1 bp deletion (c.1347delG) in exon 1 of TPRN. The function of the encoded protein, taperin, is unknown; yet, partial homology to the actin-caping protein phostensin suggests a role in actin dynamics.

Indexed as

MutationAmino Acid SequenceAnimalsBase SequenceChromosome MappingChromosomes, Human, Pair 9CochleaConsanguinityDNADNA PrimersExonsFemaleFrameshift MutationGene ExpressionGenes, RecessiveHearing LossDNADNA PrimersProteinsTPRN protein, human

Identifiers

PMID20170898
PMCPMC2833376
OpenAlexW1968470805

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.