Evidence map›Paper›PMID 20169075›Full record

ArticlePloS one2010

Visualizing interactions along the Escherichia coli twin-arginine translocation pathway using protein fragment complementation.

Jan S Kostecki, Haiming Li, Raymond J Turner, Matthew P DeLisa

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 41 citations in OpenAlex.

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  12. Twin-arginine-dependent translocation of folded proteins.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jan S KosteckiDepartment of Biomedical Engineering, Cornell University, Ithaca, New York, United States of America.
Haiming Li
Raymond J Turner
Matthew P DeLisa
Cornell University · USUniversity of Calgary · CA

Funding

CIHR 49422
6 · The paper itself

Abstract

The twin-arginine translocation (Tat) pathway is well known for its ability to export fully folded substrate proteins out of the cytoplasm of gram-negative and gram-positive bacteria. Studies of this mechanism in Escherichia coli have identified numerous transient protein-protein interactions that guide export-competent proteins through the Tat pathway. To visualize these interactions, we have adapted bimolecular fluorescence complementation (BiFC) to detect protein-protein interactions along the Tat pathway of living cells. Fragments of the yellow fluorescent protein (YFP) were fused to soluble and transmembrane factors that participate in the translocation process including Tat substrates, Tat-specific proofreading chaperones and the integral membrane proteins TatABC that form the translocase. Fluorescence analysis of these YFP chimeras revealed a wide range of interactions such as the one between the Tat substrate dimethyl sulfoxide reductase (DmsA) and its dedicated proofreading chaperone DmsD. In addition, BiFC analysis illuminated homo- and hetero-oligomeric complexes of the TatA, TatB and TatC integral membrane proteins that were consistent with the current model of translocase assembly. In the case of TatBC assemblies, we provide the first evidence that these complexes are co-localized at the cell poles. Finally, we used this BiFC approach to capture interactions between the putative Tat receptor complex formed by TatBC and the DmsA substrate or its dedicated chaperone DmsD. Our results demonstrate that BiFC is a powerful approach for studying cytoplasmic and inner membrane interactions underlying bacterial secretory pathways.

Indexed as

Signal TransductionBinding SitesBlotting, WesternCarrier ProteinsEscherichia coliEscherichia coli ProteinsFlow CytometryIntracellular Signaling Peptides and ProteinsIron-Sulfur ProteinsLuminescent MeasurementsLuminescent ProteinsMembrane Transport ProteinsMolecular ChaperonesMutationOxidoreductasesProtein BindingCarrier Proteinsdimethyl sulfoxide reductaseDmsD protein, E coliEscherichia coli ProteinsIntracellular Signaling Peptides and ProteinsIron-Sulfur ProteinsLuminescent ProteinsMembrane Transport ProteinsMolecular ChaperonesOxidoreductasesRecombinant Fusion ProteinsTatA protein, E coliTatB protein, E coliTatC protein, E coli

Identifiers

PMID20169075
PMCPMC2821923
OpenAlexW2050207946

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.