Evidence map›Paper›PMID 20169021›Full record

ArticleStudies in mycology2009

A class-wide phylogenetic assessment of Dothideomycetes.

C L Schoch, P W Crous, J Z Groenewald, E W A Boehm, T I Burgess, J de Gruyter, G S de Hoog, L J Dixon, M Grube, C Gueidan and 44 more

Open access · greenAbstract read
In one paragraph

Article in Studies in mycology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 207 papers.

0numbers the graph read from it
0cells of the map it votes in
207citing papers in PubMed
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

207 citing papers in PubMed, 602 citations in OpenAlex.

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147 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

54 authors at 20 institutions in 13 countries.

C L SchochNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.
P W Crous
J Z Groenewald
E W A Boehm
T I Burgess
J de Gruyter
G S de Hoog
L J Dixon
M Grube
C Gueidan
Y Harada
S Hatakeyama
K Hirayama
T Hosoya
S M Huhndorf
K D Hyde
E B G Jones
J Kohlmeyer
A Kruys
Y M Li
R Lücking
H T Lumbsch
L Marvanová
J S Mbatchou
A H McVay
A N Miller
G K Mugambi
L Muggia
M P Nelsen
P Nelson
C A Owensby
A J L Phillips
S Phongpaichit
S B Pointing
V Pujade-Renaud
H A Raja
E Rivas Plata
B Robbertse
C Ruibal
J Sakayaroj
T Sano
L Selbmann
C A Shearer
T Shirouzu
B Slippers
S Suetrong
K Tanaka
B Volkmann-Kohlmeyer
M J Wingfield
A R Wood
J H C Woudenberg
H Yonezawa
Y Zhang
J W Spatafora
Westerdijk Fungal Biodiversity Institute · NLField Museum of Natural History · USHirosaki University · JPNational Center for Genetic Engineering and Biotechnology · THOregon State University · USUniversity of Graz · ATAgricultural Research Service · USKean University · USMae Fah Luang University · THMasaryk University · CZMurdoch University · AUNational Center for Biotechnology Information · USNational Institutes of Health · USNational Museum of Nature and Science · JPNational Museums of Kenya · KEPrince of Songkla University · THUniversidade Nova de Lisboa · PTUniversity of Chicago · USUniversity of Hong Kong · HKUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a comprehensive phylogeny derived from 5 genes, nucSSU, nucLSU rDNA, TEF1, RPB1 and RPB2, for 356 isolates and 41 families (six newly described in this volume) in Dothideomycetes. All currently accepted orders in the class are represented for the first time in addition to numerous previously unplaced lineages. Subclass Pleosporomycetidae is expanded to include the aquatic order Jahnulales. An ancestral reconstruction of basic nutritional modes supports numerous transitions from saprobic life histories to plant associated and lichenised modes and a transition from terrestrial to aquatic habitats are confirmed. Finally, a genomic comparison of 6 dothideomycete genomes with other fungi finds a high level of unique protein associated with the class, supporting its delineation as a separate taxon.

Indexed as

AscomycotaDothideomycetafungal evolutionlichensmultigene phylogenyPezizomycotinaphylogenomicsplant pathogenssaprobesTree of Life

Identifiers

PMID20169021
PMCPMC2816964
OpenAlexW2153780133

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.