Evidence map›Paper›PMID 20164357›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2010

Contribution of the global subunit structure and stargazin on the maturation of AMPA receptors.

Natalie F Shanks, Tomohiko Maruo, Anthony N Farina, Mark H Ellisman, Terunaga Nakagawa

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. The open gate of the AMPA receptor forms a CaNature structural & molecular biology · 2024
    Article
  4. Clustering of CaJournal of neurochemistry · 2023
    Article
  5. Article
  6. Review
  7. AMPA receptor structure and auxiliary subunits.The Journal of physiology · 2021
    Review
  8. Article
  9. Neuronal L-Type Calcium Channel Signaling to the Nucleus Requires a Novel CaMKIIα-Shank3 Interaction.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. A Novel HumanThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  18. Article
  19. Structural rearrangement of the intracellular domains during AMPA receptor activation.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Natalie F ShanksDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, USA.
Tomohiko Maruo
Anthony N Farina
Mark H Ellisman
Terunaga Nakagawa
University of California San Diego · US

Funding

GENETIC MECHANISMS AND REGULATIONT32GM007240 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMPTON, RANDOLPH Y. · 1985 to 2019
$23.8M
MOLECULAR BIOPHYSICS TRAINING PROGRAMT32GM008326 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 1989 to 2020
$7.5M
Microscopy &Image Analysis of Unstained MacromoleculesR37GM033050 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAKER, TIMOTHY S · 2004 to 2013
$5.6M
MICROSCOPY &IMAGE ANALYSIS OF UNSTAINED MACROMOLECULESR01GM033050 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAKER, TIMOTHY S · 1985 to 2017
$4.3M
TRANSMISSION ELECTRON MICROSCOPE: STRUCTURAL &CELL BIOL: MEMBRANE TRANSPORT, GAS10RR020016 · NCRR · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI BAKER, TIMOTHY S · 2004 to 2004
$2.0M
Molecular Anatomy of Mature and Immature Glutamate ReceptorsR01HD061543 · NICHD · VANDERBILT UNIVERSITY · PI NAKAGAWA, TERUNAGA · 2010 to 2014
$1.5M
NCRR NIH HHS S10 RR020016NICHD NIH HHS R01 HD061543NIGMS NIH HHS R01 GM033050NIGMS NIH HHS R37 GM033050NIGMS NIH HHS T32 GM007240NIGMS NIH HHS T32 GM008326
6 · The paper itself

Abstract

Subunit assembly governs regulation of AMPA receptor (AMPA-R) synaptic delivery and determines biophysical parameters of the ion channel. However, little is known about the molecular pathways of this process. Here, we present single-particle EM three-dimensional structures of dimeric biosynthetic intermediates of the GluA2 subunit of AMPA-Rs. Consistent with the structures of intact tetramers, the N-terminal domains of the biosynthetic intermediates form dimers. Transmembrane domains also dimerize despite the two ligand-binding domains (LBDs) being separated. A significant difference was detected between the dimeric structures of the wild type and the L504Y mutant, a point mutation that blocks receptor trafficking and desensitization. In contrast to the wild type, whose LBD is separated, the LBD of the L504Y mutant was detected as a single density. Our results provide direct structural evidence that separation of the LBD within the intact dimeric subunits is critical for efficient tetramerization in the endoplasmic reticulum and further trafficking of AMPA-Rs. The contribution of stargazin on the subunit assembly of AMPA-R was examined. Our data suggest that stargazin affects AMPA-R trafficking at a later stage of receptor maturation.

Indexed as

Calcium ChannelsCell Line, TransformedCells, CulturedEmbryo, MammalianGreen Fluorescent ProteinsHippocampusHumansLeucineMicroscopy, ConfocalMicroscopy, Electron, ScanningModels, MolecularMolecular ConformationMutationNeuronsProtein Interaction Domains and MotifsProtein Structure, TertiaryCACNG2 protein, humanCalcium Channelsglutamate receptor ionotropic, AMPA 2Green Fluorescent ProteinsLeucineReceptors, AMPATyrosine

Identifiers

PMID20164357
PMCPMC2842908
OpenAlexW2100087262

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.