Evidence map›Paper›PMID 20161968›Full record

ArticleMarine drugs2010

Iron complexation to oxygen rich marine natural products: a computational study.

Thomas J Manning, Jimmy Williams, Joey Jarrard, Teresa Gorman

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Recent advances and limitations in the application of kahalalides for the control of cancer.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Thomas J ManningChemistry Department, Valdosta State University, Valdosta, GA 31698, USA. tmanning@valdosta.edu
Jimmy Williams
Joey Jarrard
Teresa Gorman
Valdosta State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The natural products kahalalide F, halichondrin B, and discodermolide are relatively large structures that were originally harvested from marine organisms. They are oxygen rich structures that, to varying degrees, should have the ability to bind iron (II or III) by Fe-O and/or Fe-N bonds. In this semi empirical study, the binding of these natural products to iron (II) is studied and the aqueous stability factor (ASF) is used to determine which bonding configuration is most stable. The energy, the complex charge (+1), the average Fe-O (or Fe-N) bond distances and the dipole moments are used to calculate the ASF. The ASF provides insight to which complex will be the most stable and water soluble, important for a medicinal application. The ability of a molecule with a more than six oxygen and/or nitrogen atoms to bind iron (hexavalent, octahedral) by shifting which six atoms (O/N) are bound to the iron qualifies it as a polarity adaptive molecule.

Indexed as

AlkanesAnimalsAntineoplastic AgentsBiological ProductsCarbamatesCell Line, TumorChemical PhenomenaComputational BiologyDepsipeptidesEthers, CyclicHumansInhibitory Concentration 50IronLactonesMacrolidesModels, MolecularAlkanesAntineoplastic AgentsBiological ProductsCarbamatesDepsipeptidesdiscodermolideEthers, Cyclichalichondrin BIronkahalalide FLactonesMacrolidesOxygenPolyether PolyketidesPyronesSiderophoresaqueous stability factorcomputationaldiscodermolidehalichondrin Bkahalalide Fmarine natural product

Identifiers

PMID20161968
PMCPMC2817920
OpenAlexW1973083870

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.