Evidence map›Paper›PMID 20161741›Full record

ArticlePloS one2010

Functional overlap between eIF4G isoforms in Saccharomyces cerevisiae.

Bryan K Clarkson, Wendy V Gilbert, Jennifer A Doudna

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 57 citations in OpenAlex.

  1. Med9 Is a Novel eIF4E-Interacting Protein inInternational journal of molecular sciences · 2026
    Article
  2. Review
  3. Article
  4. The mechanism of mRNA activation.bioRxiv : the preprint server for biology · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Characterization of an Atypical eIF4E Ortholog inInternational journal of molecular sciences · 2021
    Article
  9. Article
  10. eIF4E and Interactors from Unicellular Eukaryotes.International journal of molecular sciences · 2020
    Review
  11. Article
  12. Article
  13. Review
  14. Paralog-Specific Functions ofG3 (Bethesda, Md.) · 2017
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Bryan K ClarksonDepartment of Molecular and Cell Biology, University of California, Berkeley, California, United States of America.
Wendy V Gilbert
Jennifer A Doudna
University of California, Berkeley · USHoward Hughes Medical Institute · US

Funding

Mechanisms and Regulation of Yeast Internal Ribosome Entry SitesR00GM081399 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GILBERT, WENDY VICTORIA · 2008 to 2010
$915k
Howard Hughes Medical InstituteNIGMS NIH HHS R00 GM081399
6 · The paper itself

Abstract

Initiation factor eIF4G is a key regulator of eukaryotic protein synthesis, recognizing proteins bound at both ends of an mRNA to help recruit messages to the small (40S) ribosomal subunit. Notably, the genomes of a wide variety of eukaryotes encode multiple distinct variants of eIF4G. We found that deletion of eIF4G1, but not eIF4G2, impairs growth and global translation initiation rates in budding yeast under standard laboratory conditions. Not all mRNAs are equally sensitive to loss of eIF4G1; genes that encode messages with longer poly(A) tails are preferentially affected. However, eIF4G1-deletion strains contain significantly lower levels of total eIF4G, relative to eIF4G2-delete or wild type strains. Homogenic strains, which encode two copies of either eIF4G1 or eIF4G2 under native promoter control, express a single isoform at levels similar to the total amount of eIF4G in a wild type cell and have a similar capacity to support normal translation initiation rates. Polysome microarray analysis of these strains and the wild type parent showed that translationally active mRNAs are similar. These results suggest that total eIF4G levels, but not isoform-specific functions, determine mRNA-specific translational efficiency.

Indexed as

Protein BiosynthesisBase SequenceCell DivisionEukaryotic Initiation Factor-4FEukaryotic Initiation Factor-4GGene Expression ProfilingGene Expression Regulation, FungalMolecular Sequence DataMutationOligonucleotide Array Sequence AnalysisPolyribosomesProtein IsoformsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence DeletionEukaryotic Initiation Factor-4FEukaryotic Initiation Factor-4GProtein IsoformsSaccharomyces cerevisiae ProteinsTIF4631 protein, S cerevisiaeTIF4632 protein, S cerevisiae

Identifiers

PMID20161741
PMCPMC2817733
OpenAlexW1991769704

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.