Evidence map›Paper›PMID 20160705›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2010

Zinc-finger nucleases as a novel therapeutic strategy for targeting hepatitis B virus DNAs.

Thomas J Cradick, Kathy Keck, Shannon Bradshaw, Andrew C Jamieson, Anton P McCaffrey

Open access · hybridAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 183 citations in OpenAlex.

  1. Review
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  11. New Treatment Options in Chronic Hepatitis B: How Close Are We to Cure?Infectious diseases & clinical microbiology · 2023
    Review
  12. Review
  13. Review
  14. Review
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  16. Gene editing and its applications in biomedicine.Science China. Life sciences · 2022
    Review
  17. Review
  18. Viral hepatitis: Innovations and expectations.World journal of gastroenterology · 2022
    Review
  19. Review
  20. Review

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Thomas J CradickDepartment of Internal Medicine, University of Iowa, Iowa City, Iowa 52242, USA.
Kathy Keck
Shannon Bradshaw
Andrew C Jamieson
Anton P McCaffrey
University of Iowa · USDrew University · US

Funding

Vector Core-Core 2P30DK054759 · NIDDK · UNIVERSITY OF IOWA · PI Alejandro Antonio Pezzulo · 1998 to 2026
$30.5M
Novel Therapeutic Approaches for Eliminating Hepatitis B Virus DNAs and RNAsR01AI068885 · NIAID · UNIVERSITY OF IOWA · PI MCCAFFREY, ANTON P · 2007 to 2010
$1.5M
NIAID NIH HHS AI068885-01A1NIAID NIH HHS R01 AI068885NIDDK NIH HHS DK54759NIDDK NIH HHS P30 DK054759
6 · The paper itself

Abstract

Hepatitis B virus (HBV) chronically infects 350-400 million people worldwide and causes >1 million deaths yearly. Current therapies prevent new viral genome formation, but do not target pre-existing viral genomic DNA, thus curing only approximately 1/2 of patients. We targeted HBV DNA for cleavage using zinc-finger nucleases (ZFNs), which cleave as dimers. Co-transfection of our ZFN pair with a target plasmid containing the HBV genome resulted in specific cleavage. After 3 days in culture, 26% of the target remained linear, whereas approximately10% was cleaved and misjoined tail-to-tail. Notably, ZFN treatment decreased levels of the hepatitis C virus pregenomic RNA by 29%. A portion of cleaved plasmids are repaired in cells, often with deletions and insertions. To track misrepair, we introduced an XbaI restriction site in the spacer between the ZFN sites. Targeted cleavage and misrepair destroys the XbaI site. After 3 days in culture, approximately 6% of plasmids were XbaI-resistant. Thirteen of 16 clones sequenced contained frameshift mutations that would lead to truncations of the viral core protein. These results demonstrate, for the first time, the possibility of targeting episomal viral DNA genomes using ZFNs.

Indexed as

Blotting, NorthernCell LineCell Line, TumorDNA, ViralEndonucleasesHepatitis BHepatitis B virusHumansPolymerase Chain ReactionZinc FingersDNA, ViralEndonucleases

Identifiers

PMID20160705
PMCPMC2890117
OpenAlexW2076433001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.