Evidence map›Paper›PMID 20159609›Full record

ArticleCancer cell2010

PML-RARalpha/RXR Alters the Epigenetic Landscape in Acute Promyelocytic Leukemia.

Joost H A Martens, Arie B Brinkman, Femke Simmer, Kees-Jan Francoijs, Angela Nebbioso, Felicetto Ferrara, Lucia Altucci, Hendrik G Stunnenberg

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In one paragraph

Article in Cancer cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 177 papers.

0numbers the graph read from it
0cells of the map it votes in
177citing papers in PubMed
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

177 citing papers in PubMed, 293 citations in OpenAlex.

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  16. Targeted protein degradation: from mechanisms to clinic.Nature reviews. Molecular cell biology · 2024
    Review
  17. Article
  18. Article
  19. PML::RARA and GATA2 proteins interact via DNA templates to induce aberrant self-renewal in mouse and human hematopoietic cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Review

117 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Joost H A MartensDepartment of Molecular Biology, Nijmegen Centre for Molecular Life Sciences, Radboud University, the Netherlands.
Arie B Brinkman
Femke Simmer
Kees-Jan Francoijs
Angela Nebbioso
Felicetto Ferrara
Lucia Altucci
Hendrik G Stunnenberg
Radboud University Medical Center · NLRadboud University Nijmegen · NLUniversity of Naples Federico II · ITOspedale Antonio Cardarelli · ITRadboud Institute for Molecular Life Sciences · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many different molecular mechanisms have been associated with PML-RARalpha-dependent transformation of hematopoietic progenitors. Here, we identified high confidence PML-RARalpha binding sites in an acute promyelocytic leukemia (APL) cell line and in two APL primary blasts. We found colocalization of PML-RARalpha with RXR to the vast majority of these binding regions. Genome-wide epigenetic studies revealed that treatment with pharmacological doses of all-trans retinoic acid induces changes in H3 acetylation, but not H3K27me3, H3K9me3, or DNA methylation at the PML-RARalpha/RXR binding sites or at nearby target genes. Our results suggest that PML-RARalpha/RXR functions as a local chromatin modulator and that specific recruitment of histone deacetylase activities to genes important for hematopoietic differentiation, RAR signaling, and epigenetic control is crucial to its transforming potential.

Indexed as

Epigenesis, GeneticAcetylationBinding SitesCell DifferentiationCell LineChromatin Assembly and DisassemblyDNA MethylationHistone DeacetylasesHistonesHumansLeukemia, Promyelocytic, AcuteOncogene Proteins, FusionRetinoid X ReceptorsSignal TransductionHistone DeacetylasesHistonesOncogene Proteins, Fusionpromyelocytic leukemia-retinoic acid receptor alpha fusion oncoproteinRetinoid X Receptors

Identifiers

PMID20159609
OpenAlexW2164508407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.