Evidence map›Paper›PMID 20158237›Full record

ArticleJournal of the American Chemical Society2010

Biosynthesis of spinosyn in Saccharopolyspora spinosa: synthesis of permethylated rhamnose and characterization of the functions of SpnH, SpnI, and SpnK.

Hak Joong Kim, Jess A White-Phillip, Yasushi Ogasawara, Nara Shin, Eta A Isiorho, Hung-Wen Liu

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 57 citations in OpenAlex.

  1. iCASRED, a scarless DNA editing tool inSynthetic and systems biotechnology · 2025
    Article
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  5. Article
  6. Article
  7. Article
  8. Functional Characterization of a Regiospecific Sugar-Applied and environmental microbiology · 2022
    Article
  9. Increasing the heterologous production of spinosad inSynthetic and systems biotechnology · 2021
    Article
  10. Article
  11. Article
  12. Natural product derived insecticides: discovery and development of spinetoram.Journal of industrial microbiology & biotechnology · 2016
    Review
  13. Article
  14. Article
  15. Chemoenzymatic synthesis of spinosyn A.Angewandte Chemie (International ed. in English) · 2014
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hak Joong KimDivision of Medicinal Chemistry, College of Pharmacy, Department of Chemistry and Biochemistry, and Institute of Cellular & Molecular Biology, University of Texas at Austin, Austin, Texas 78712, USA.
Jess A White-Phillip
Yasushi Ogasawara
Nara Shin
Eta A Isiorho
Hung-Wen Liu
The University of Texas at Austin · US

Funding

Mechanistic Studies of Deoxy Sugar BiosynthesisR01GM035906 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI LIU, HUNG-WEN · 1986 to 2023
$6.1M
MECHANISMS OF BIOSYNTHETIC FORMATION OF DEOXY SUGARSR37GM035906 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI LIU, HUNG-WEN · 1999 to 2008
$3.4M
NIGMS NIH HHS GM35906NIGMS NIH HHS R01 GM035906NIGMS NIH HHS R37 GM035906
6 · The paper itself

Abstract

Spinosyn A is a polyketide-derived macrolide produced by Saccharopolyspora spinosa and is an active ingredient in several commercial insecticides. It is glycosylated by a tri-O-methylated rhamnose at C-9 and a forosamine at C-17. Previous studies indicated that the rhamnose methyltransferases are encoded by the spnH, spnI, and spnK genes. To verify the functions of these methyltransferases and to study how they are coordinated to achieve the desired level of methylation of rhamnose, we studied the catalytic properties of the spnH, spnI, and spnK gene products and validated their roles in the permethylation process of spinosyn A. Our data reported herein firmly established that SpnH, SpnI, and SpnK are the respective rhamnose 4'-, 2'-, and 3'-O-methyltransferase. Investigation of the order of the methylation events revealed that only one route catalyzed by SpnI, SpnK, and SpnH in sequence is productive for the permethylation of the rhamnose moiety. Moreover, the completion of rhamnose permethylation is likely achieved by the proper control of the expression levels of the methyltransferase genes involved. These results set the stage for future exploitation of the spinosyn biosynthetic pathway to produce targeted spinosyn derivatives and, perhaps, new analogues.

Indexed as

BiocatalysisMacrolidesMethylationMethyltransferasesRhamnoseSaccharopolysporaMacrolidesMethyltransferasesRhamnosespinosyn A

Identifiers

PMID20158237
PMCPMC2832084
OpenAlexW1991384877

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.