ArticleDatabase : the journal of biological databases and curation2009
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Article in Database : the journal of biological databases and curation, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
24 citing papers in PubMed, 45 citations in OpenAlex.
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- Exploring a unique class of flavoenzymes: Identification and biochemical characterization of ribosomal RNA dihydrouridine synthase.Proceedings of the National Academy of Sciences of the United States of America · 2024Article
- Alternate routes to mnmJournal of bacteriology · 2024Article
- Survey and Validation of tRNA Modifications and Their Corresponding Genes inBiomolecules · 2020Article
- SubtiWiki in 2018: from genes and proteins to functional network annotation of the model organism Bacillus subtilis.Nucleic acids research · 2018Article
- Reconstruction of the Regulatory Network for Bacillus subtilis and Reconciliation with Gene Expression Data.Frontiers in microbiology · 2016Article
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- Reconstruction of gene networks using prior knowledge.BMC systems biology · 2015Article
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- SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information.Nucleic acids research · 2014Article
- Robust data-driven incorporation of prior knowledge into the inference of dynamic regulatory networks.Bioinformatics (Oxford, England) · 2013Article
- BioNLP Shared Task--The Bacteria Track.BMC bioinformatics · 2012Article
- Linking genes to diseases with a SNPedia-Gene Wiki mashup.Journal of biomedical semantics · 2012Article
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- GONUTS: the Gene Ontology Normal Usage Tracking System.Nucleic acids research · 2012Article
- SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis.Nucleic acids research · 2012Article
- EcoliWiki: a wiki-based community resource for Escherichia coli.Nucleic acids research · 2012Article
- Mining the Gene Wiki for functional genomic knowledge.BMC genomics · 2011Article
- Hierarchical evolution of the bacterial sporulation network.Current biology : CB · 2010Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Bacillus subtilis is the model organism for Gram-positive bacteria, with a large amount of publications on all aspects of its biology. To facilitate genome annotation and the collection of comprehensive information on B. subtilis, we created SubtiWiki as a community-oriented annotation tool for information retrieval and continuous maintenance. The wiki is focused on the needs and requirements of scientists doing experimental work. This has implications for the design of the interface and for the layout of the individual pages. The pages can be accessed primarily by the gene designations. All pages have a similar flexible structure and provide links to related gene pages in SubtiWiki or to information in the World Wide Web. Each page gives comprehensive information on the gene, the encoded protein or RNA as well as information related to the current investigation of the gene/protein. The wiki has been seeded with information from key publications and from the most relevant general and B. subtilis-specific databases. We think that SubtiWiki might serve as an example for other scientific wikis that are devoted to the genes and proteins of one organism.Database URL: The wiki can be accessed at http://subtiwiki.uni-goettingen.de/
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.