Evidence map›Paper›PMID 20157002›Full record

ArticleGenetics2010

Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase.

Jing Zhang, Akeel A Mahdi, Geoffrey S Briggs, Robert G Lloyd

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Identification ofJournal of bacteriology · 2023
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  17. Superfamily 2 helicases.Frontiers in bioscience (Landmark edition) · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jing ZhangInstitute of Genetics, University of Nottingham, Queen's Medical Centre, Nottingham, United Kingdom.
Akeel A Mahdi
Geoffrey S Briggs
Robert G Lloyd
Queen's Medical Centre · GBUniversity of Nottingham · GB

Funding

Medical Research Council G0800970
6 · The paper itself

Abstract

RuvABC and RecG are thought to provide alternative pathways for the late stages of recombination in Escherichia coli. Inactivation of both blocks the recovery of recombinants in genetic crosses. RuvABC resolves Holliday junctions, with RuvAB driving branch migration and RuvC catalyzing junction cleavage. RecG also drives branch migration, but no nuclease has been identified that might act with RecG to cleave junctions, apart from RusA, which is not normally expressed. We searched for an alternative nuclease using a synthetic lethality assay to screen for mutations causing inviability in the absence of RuvC, on the premise that a strain without any ability to cut junctions might be inviable. All the mutations identified mapped to polA, dam, or uvrD. None of these genes encodes a nuclease that cleaves Holliday junctions. Probing the reason for the inviability using the RusA Holliday junction resolvase provided strong evidence in each case that the RecG pathway is very ineffective at removing junctions and indicated that a nuclease component most probably does not exist. It also revealed new suppressors of recG, which were located to the ssb gene. Taken together with the results from the synthetic lethality assays, the properties of the mutant SSB proteins provide evidence that, rather than promoting recombination, a major function of RecG is to curb potentially pathological replication initiated via PriA protein at sites remote from oriC.

Indexed as

Amino Acid SubstitutionBacterial ProteinsChromosomes, BacterialDNA, BacterialDNA HelicasesDNA RepairDNA ReplicationEndodeoxyribonucleasesEscherichia coliEscherichia coli ProteinsHolliday Junction ResolvasesMicrobial ViabilityModels, BiologicalRecombination, GeneticSuppression, GeneticBacterial ProteinsDNA, BacterialDNA HelicasesEndodeoxyribonucleasesEscherichia coli ProteinsHolliday junction DNA helicase, E coliHolliday Junction ResolvasesRecG protein, E coliRuvB protein, BacteriaruvC protein, E coli

Identifiers

PMID20157002
PMCPMC2870958
OpenAlexW2053778670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.