Evidence map›Paper›PMID 20155410›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010

Genetic and physical fine mapping of Scmv2, a potyvirus resistance gene in maize.

Christina Roenn Ingvardsen, Yongzhong Xing, Ursula Karoline Frei, Thomas Lübberstedt

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Genome-wide association and genomic prediction of resistance to maize lethal necrosis disease in tropical maize germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  7. Article
  8. Article
  9. Genetic analysis of resistance to six virus diseases in a multiple virus-resistant maize inbred line.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Article
  10. Article
  11. Article
  12. Responses of maize (Zea mays L.) near isogenic lines carrying Wsm1, Wsm2, and Wsm3 to three viruses in the Potyviridae.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Christina Roenn IngvardsenDepartment of Genetics and Biotechnology, Faculty of Agricultural Sciences, University of Aarhus, Forsøgsvej 1, 4200, Slagelse, Denmark. cri@life.ku.dk
Yongzhong Xing
Ursula Karoline Frei
Thomas Lübberstedt
Iowa State University · USAarhus University · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane mosaic virus (SCMV) is an important virus pathogen both in European and Chinese maize production, causing serious losses in grain and forage yield in susceptible cultivars. Two major resistance loci confer resistance to SCMV, one located on chromosome 3 (Scmv2) and one on chromosome 6 (Scmv1). We developed a large isogenic mapping population segregating in the Scmv2, but not the Scmv1 region, to minimize genetic variation potentially affecting expression of SCMV resistance. We fine mapped Scmv2 to a region of 0.28 cM, covering a physical distance of 1.3426 Mb, and developed six new polymorphic SSR markers based on publicly available BAC sequences within this region. At present, we still have three recombinants left between Scmv2 and the nearest polymorphic marker on either side of the Scmv2 locus. The region showed synteny to a 1.6 Mb long sequence on chromosome 12 in rice. Analysis of the public B73 BAC library as well as the syntenic rice region did not reveal any similarity to known resistance genes. However, four new candidate genes with a possible involvement in movement of virus were detected.

Indexed as

Chromosome MappingChromosomes, Artificial, BacterialChromosomes, PlantDNA, PlantExpressed Sequence TagsGenes, PlantGenetic MarkersModels, GeneticMosaic VirusesOryzaPhysical Chromosome MappingPlant DiseasesPolymorphism, GeneticPotyvirusZea maysDNA, PlantGenetic Markers

Identifiers

PMID20155410
OpenAlexW2075829735

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.