Evidence map›Paper›PMID 20154359›Full record

ArticleThe Journal of biological chemistry2010

Protein complex of Drosophila ATRX/XNP and HP1a is required for the formation of pericentric beta-heterochromatin in vivo.

Alexander V Emelyanov, Alexander Y Konev, Elena Vershilova, Dmitry V Fyodorov

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. eLife · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alexander V EmelyanovDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York 10461.
Alexander Y KonevDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York 10461.
Elena VershilovaDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York 10461.
Dmitry V FyodorovDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York 10461. Electronic address: dfyodoro@aecom.yu.edu.
Albert Einstein College of Medicine · US

Funding

Chromatin Transitions during Early Embryonic Development in Drosophila melanogasterR01GM074233 · NIGMS · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI FYODOROV, DMITRY V · 2005 to 2021
$5.8M
NIGMS NIH HHS GM07423NIGMS NIH HHS R01 GM074233
6 · The paper itself

Abstract

ATRX belongs to the family of SWI2/SNF2-like ATP-dependent nucleosome remodeling molecular motor proteins. Mutations of the human ATRX gene result in a severe genetic disorder termed X-linked alpha-thalassemia mental retardation (ATR-X) syndrome. Here we perform biochemical and genetic analyses of the Drosophila melanogaster ortholog of ATRX. The loss of function allele of the Drosophila ATRX/XNP gene is semilethal. Drosophila ATRX is expressed throughout development in two isoforms, p185 and p125. ATRX185 and ATRX125 form distinct multisubunit complexes in fly embryo. The ATRX185 complex comprises p185 and heterochromatin protein HP1a. Consistently, ATRX185 but not ATRX125 is highly concentrated in pericentric beta-heterochromatin of the X chromosome in larval cells. HP1a strongly stimulates biochemical activities of ATRX185 in vitro. Conversely, ATRX185 is required for HP1a deposition in pericentric beta-heterochromatin of the X chromosome. The loss of function allele of the ATRX/XNP gene and mutant allele that does not express p185 are strong suppressors of position effect variegation. These results provide evidence for essential biological functions of Drosophila ATRX in vivo and establish ATRX as a major determinant of pericentric beta-heterochromatin identity.

Indexed as

AnimalsBlotting, WesternChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA HelicasesDrosophila melanogasterDrosophila ProteinsElectrophoresis, Polyacrylamide GelHeterochromatinMutationProtein BindingX ChromosomeChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA HelicasesDrosophila ProteinsHeterochromatinXNP protein, Drosophila

Identifiers

PMID20154359
PMCPMC2865330
OpenAlexW2068771177

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.