Evidence map›Paper›PMID 20154108›Full record

ArticleApplied and environmental microbiology2010

Census of the viral metagenome within an activated sludge microbial assemblage.

Larissa C Parsley, Erin J Consuegra, Stephen J Thomas, Jaysheel Bhavsar, Andrew M Land, Nadia N Bhuiyan, Mustafa A Mazher, Robert J Waters, K Eric Wommack, Willie F Harper and 1 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Characterization of Prophages inJournal of microbiology and biotechnology · 2022
    Article
  4. Article
  5. Insights into the global freshwater virome.Frontiers in microbiology · 2022
    Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Isolation and Genomic Characterization of anFrontiers in microbiology · 2019
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Larissa C ParsleyDepartment of Biological Sciences, Auburn University, Auburn, AL 368491, USA.
Erin J Consuegra
Stephen J Thomas
Jaysheel Bhavsar
Andrew M Land
Nadia N Bhuiyan
Mustafa A Mazher
Robert J Waters
K Eric Wommack
Willie F Harper
Mark R Liles

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The viral metagenome within an activated sludge microbial assemblage was sampled using culture-dependent and culture-independent methods and compared to the diversity of activated sludge bacterial taxa. A total of 70 unique cultured bacterial isolates, 24 cultured bacteriophages, 829 bacterial metagenomic clones of 16S rRNA genes, and 1,161 viral metagenomic clones were subjected to a phylogenetic analysis.

Indexed as

BiodiversityMetagenomeBacteriaBacteriophagesCluster AnalysisDNA, BacterialDNA, ViralMolecular Sequence DataPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNASewageVirus CultivationVirusesDNA, BacterialDNA, ViralRNA, Ribosomal, 16SSewage

Identifiers

PMID20154108
PMCPMC2849206

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.