Evidence map›Paper›PMID 20153379›Full record

ReviewAntiviral research2010

Practical application of bioinformatics by the multidisciplinary VIZIER consortium.

Alexander E Gorbalenya, Philippe Lieutaud, Mark R Harris, Bruno Coutard, Bruno Canard, Gerard J Kleywegt, Alexander A Kravchenko, Dmitry V Samborskiy, Igor A Sidorov, Andrey M Leontovich and 1 more

Open access · greenAbstract readReview
In one paragraph

Review in Antiviral research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 43 citations in OpenAlex.

  1. Discovery of the order 'Virus evolution · 2026
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  8. A nidovirus perspective on SARS-CoV-2.Biochemical and biophysical research communications · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Alexander E GorbalenyaMolecular Virology Laboratory, Department of Medical Microbiology, Center for Infectious Diseases, Leiden University Medical Center, P.O. Box 9600, E4-P, 2300 RC Leiden, The Netherlands. A.E.Gorbalenya@lumc.nl
Philippe Lieutaud
Mark R Harris
Bruno Coutard
Bruno Canard
Gerard J Kleywegt
Alexander A Kravchenko
Dmitry V Samborskiy
Igor A Sidorov
Andrey M Leontovich
T Alwyn Jones
Lomonosov Moscow State University · RUUppsala University · SEArchitecture et Fonction des Macromolécules Biologiques · FRLeiden University Medical Center · NLCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This review focuses on bioinformatics technologies employed by the EU-sponsored multidisciplinary VIZIER consortium (Comparative Structural Genomics of Viral Enzymes Involved in Replication, FP6 PROJECT: 2004-511960, active from 1 November 2004 to 30 April 2009), to achieve its goals. From the management of the information flow of the project, to bioinformatics-mediated selection of RNA viruses and prediction of protein targets, to the analysis of 3D protein structures and antiviral compounds, these technologies provided a communication framework and integrated solutions for steady and timely advancement of the project. RNA viruses form a large class of major pathogens that affect humans and domestic animals. Such RNA viruses as HIV, Influenza virus and Hepatitis C virus are of prime medical concern today, but the identities of viruses that will threaten human population tomorrow are far from certain. To contain outbreaks of common or newly emerging infections, prototype drugs against viruses representing the Virus Universe must be developed. This concept was championed by the VIZIER project which brought together experts in diverse fields to produce a concerted and sustained effort for identifying and validating targets for antivirus therapy in dozens of RNA virus lineages.

Indexed as

AnimalsBiomedical ResearchComputational BiologyDatabases, ProteinEnzymesEuropean UnionHumansProtein Structure, TertiaryRNA VirusesViral ProteinsVirus ReplicationEnzymesViral Proteins

Identifiers

PMID20153379
PMCPMC7172516
OpenAlexW2032556187

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.