Evidence map›Paper›PMID 20150898›Full record

ArticleThe EMBO journal2010

Regulation of clathrin adaptor function in endocytosis: novel role for the SAM domain.

Santiago M Di Pietro, Duilio Cascio, Daniel Feliciano, James U Bowie, Gregory S Payne

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 44 citations in OpenAlex.

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  11. Optimizing model representation for integrative structure determination of macromolecular assemblies.Proceedings of the National Academy of Sciences of the United States of America · 2019
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  20. Quantifying the dynamic interactions between a clathrin-coated pit and cargo molecules.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Santiago M Di PietroDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA. santiago.dipietro@colostate.edu
Duilio Cascio
Daniel Feliciano
James U Bowie
Gregory S Payne
University of California, Los Angeles · USColorado State University · US

Funding

MOLECULAR STUDIES OF SELECTIVE PROTEIN TRANSPORTR01GM039040 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PAYNE, GREGORY S · 1988 to 2016
$6.4M
STRUCTURE/FUNCTION OF SAM DOMAINSR01CA081000 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOWIE, JAMES U · 1999 to 2007
$1.9M
NCI NIH HHS R01 CA081000NIGMS NIH HHS GM39040NIGMS NIH HHS R01 GM039040
6 · The paper itself

Abstract

During clathrin-mediated endocytosis, adaptor proteins play central roles in coordinating the assembly of clathrin coats and cargo selection. Here we characterize the binding of the yeast endocytic adaptor Sla1p to clathrin through a variant clathrin-binding motif that is negatively regulated by the Sla1p SHD2 domain. The crystal structure of SHD2 identifies the domain as a sterile alpha-motif (SAM) domain and shows a propensity to oligomerize. By co-immunoprecipitation, Sla1p binds to clathrin and self-associates in vivo. Mutations in the clathrin-binding motif that abolish clathrin binding and structure-based mutations in SHD2 that impede self-association result in endocytosis defects and altered dynamics of Sla1p assembly at the sites of endocytosis. These results define a novel mechanism for negative regulation of clathrin binding by an adaptor and suggest a role for SAM domains in clathrin-mediated endocytosis.

Indexed as

Adaptor Proteins, Vesicular TransportAmino Acid MotifsAmino Acid SequenceBinding SitesClathrinCytoskeletal ProteinsEndocytosisMolecular Sequence DataProtein Structure, TertiarySaccharomyces cerevisiae ProteinsAdaptor Proteins, Vesicular TransportClathrinCytoskeletal ProteinsSaccharomyces cerevisiae ProteinsSLA1 protein, S cerevisiae

Identifiers

PMID20150898
PMCPMC2845277
OpenAlexW1972417657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.