Evidence map›Paper›PMID 20150533›Full record

ArticleJournal of the American Society of Nephrology : JASN2010

A GREM1 gene variant associates with diabetic nephropathy.

Amy Jayne McKnight, Christopher C Patterson, Kerry A Pettigrew, David A Savage, Jill Kilner, Madeline Murphy, Denise Sadlier, Alexander P Maxwell, Warren 3/U.K. Genetics of Kidneys in Diabetes (GoKinD) Study Group

Abstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 4 pooled it
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 4 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Pooled it
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  4. Pooled it
  5. Article
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  10. Four missense genetic variants inFrontiers in endocrinology · 2023
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  11. Association ofGenes · 2022
    Article
  12. Article
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  14. Gremlin: a complex molecule regulating wound healing and fibrosis.Cellular and molecular life sciences : CMLS · 2021
    Review
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  18. Review
  19. Observational
  20. Gremlin1 and chronic pancreatitis: a new clinical target and biomarker?Journal of molecular medicine (Berlin, Germany) · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Amy Jayne McKnightNephrology Research Group, Queen's University of Belfast, c/o Regional Genetics Centre, Belfast City Hospital, Northern Ireland, United Kingdom. a.j.mcknight@qub.ac.uk
Christopher C Patterson
Kerry A Pettigrew
David A Savage
Jill Kilner
Madeline Murphy
Denise Sadlier
Alexander P Maxwell
Warren 3/U.K. Genetics of Kidneys in Diabetes (GoKinD) Study Group
Pediatric Nephrology of Alabama · USUniversity College Dublin · IEQueen's University Belfast · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gremlin, a cell growth and differentiation factor, promotes the development of diabetic nephropathy in animal models, but whether GREM1 gene variants associate with diabetic nephropathy is unknown. We comprehensively screened the 5' upstream region (including the predicted promoter), all exons, intron-exon boundaries, complete untranslated regions, and the 3' region downstream of the GREM1 gene. We identified 31 unique variants, including 24 with a minor allele frequency exceeding 5%, and 9 haplotype-tagging single nucleotide polymorphisms (htSNPs). We selected one additional variant that we predicted to alter transcription factor binding. We genotyped 709 individuals with type 1 diabetes of whom 267 had nephropathy (cases) and 442 had no evidence of kidney disease (controls). Three individual SNPs significantly associated with nephropathy at the 5% level, and two remained significant after adjustment for multiple testing. Subsequently, we genotyped a replicate population comprising 597 cases and 502 controls: this population supported an association with one of the SNPs (rs1129456; P = 0.0003). Combined analysis, adjusted for recruitment center (n = 8), suggested that the T allele conferred greater odds of nephropathy (OR 1.69; 95% CI 1.36 to 2.11). In summary, the GREM1 variant rs1129456 associates with diabetic nephropathy, perhaps explaining some of the genetic susceptibility to this condition.

Indexed as

Polymorphism, Single NucleotideAdultAmino Acid SequenceBase SequenceCase-Control StudiesDiabetic NephropathiesGene FrequencyGenotypeHumansIntercellular Signaling Peptides and ProteinsLinkage DisequilibriumMiddle AgedMolecular Sequence DataSequence AlignmentGREM1 protein, humanIntercellular Signaling Peptides and Proteins

Identifiers

PMID20150533
PMCPMC2865734
OpenAlexW2118306423

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.