Evidence map›Paper›PMID 20148779›Full record

ReviewAddiction biology2010

A comparison of selected quantitative trait loci associated with alcohol use phenotypes in humans and mouse models.

Cindy L Ehlers, Nicole A R Walter, Danielle M Dick, Kari J Buck, John C Crabbe

Abstract readComparative StudyReview
In one paragraph

Review in Addiction biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Identification of novel genetic loci and candidate genes for progressive ethanol consumption in diversity outbred mice.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Article
  3. Review
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Applying the new genomics to alcohol dependence.Alcohol (Fayetteville, N.Y.) · 2015
    Review
  12. Article
  13. Review
  14. Article
  15. Rodent models of genetic contributions to motivation to abuse alcohol.Nebraska Symposium on Motivation. Nebraska Symposium on Motivation · 2014
    Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Cindy L EhlersDepartment of Molecular and Integrative Neurosciences, The Scripps Research Institute, La Jolla, CA 92037, USA. cindye@scripps.edu
Nicole A R Walter
Danielle M Dick
Kari J Buck
John C Crabbe
Oregon Health & Science University · USPortland VA Medical Center · USScripps Research Institute · USVirginia Commonwealth University · US

Funding

Translational measures of risk for excessive alcohol consumptionP60AA010760 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI Suzanne S. Fei · 2006 to 2026
$34.5M
THERMAL AND METABOLIC DYSFUNCTION DURING WITHDRAWALP50AA010760 · NIAAA · OREGON HEALTH AND SCIENCE UNIVERSITY · PI CRABBE, JOHN C. · 1996 to 2005
$10.7M
Effects of alcohol on sleep/activity rhythms: Focus on Hypocretin/OrexinR01AA006059 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI CINDY L EHLERS · 1985 to 2026
$8.0M
RISK FACTORS FOR ALCOHOLISM IN NATIVE AMERICANSR37AA010201 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI EHLERS, CINDY L · 2007 to 2015
$7.0M
GENETIC VULNERABILITY TO DRUGS OF ABUSER01DA005228 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI BUCK, KARI J · 1989 to 2015
$4.6M
The Role of Mpdz in Ethanol Withdrawal and Genetically Correlated BehaviorsR01AA011114 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI BUCK, KARI J · 2000 to 2020
$4.3M
RISK FACTORS FOR ALCOHOLISM IN NATIVE AMERICANSR01AA010201 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI EHLERS, CINDY L · 1994 to 2006
$3.8M
REPLICABILITY OF DRUG AND GENETIC EFFECTS ON BEHAVIORR01AA012714 · NIAAA · UNIVERSITY OF WINDSOR · PI WAHLSTEN, DOUGLAS L · 2000 to 2008
$2.5M
Twin, molecular, and developmental approaches to understanding alcohol misuseK02AA018755 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI DICK, DANIELLE M · 2010 to 2019
$1.3M
ETHANOL WITHDRAWAL QTLS AND CANDIDATE GENESR29AA011114 · NIAAA · OREGON HEALTH AND SCIENCE UNIVERSITY · PI BUCK, KARI J · 1997 to 1999
–
NCRR NIH HHS U54 RR025204NIAAA NIH HHS AA 006059NIAAA NIH HHS AA010201NIAAA NIH HHS AA010760NIAAA NIH HHS AA011114NIAAA NIH HHS AA12714NIAAA NIH HHS K02 AA018755NIAAA NIH HHS P50 AA010760NIAAA NIH HHS P60 AA010760NIAAA NIH HHS R01 AA006059NIAAA NIH HHS R01 AA010201NIAAA NIH HHS R01 AA011114NIAAA NIH HHS R01 AA012714NIAAA NIH HHS R29 AA011114NIAAA NIH HHS R37 AA010201NIDA NIH HHS DA005228NIDA NIH HHS R01 DA005228
6 · The paper itself

Abstract

Evidence for genetic linkage to alcohol and other substance dependence phenotypes in areas of the human and mouse genome have now been reported with some consistency across studies. However, the question remains as to whether the genes that underlie the alcohol-related behaviors seen in mice are the same as those that underlie the behaviors observed in human alcoholics. The aims of the current set of analyses were to identify a small set of alcohol-related phenotypes in human and in mouse by which to compare quantitative trait locus (QTL) data between the species using syntenic mapping. These analyses identified that QTLs for alcohol consumption and acute and chronic alcohol withdrawal on distal mouse chromosome 1 are syntenic to a region on human chromosome 1q where a number of studies have identified QTLs for alcohol-related phenotypes. Additionally, a QTL on human chromosome 15 for alcohol dependence severity/withdrawal identified in two human studies was found to be largely syntenic with a region on mouse chromosome 9, where two groups have found QTLs for alcohol preference. In both of these cases, while the QTLs were found to be syntenic, the exact phenotypes between humans and mice did not necessarily overlap. These studies demonstrate how this technique might be useful in the search for genes underlying alcohol-related phenotypes in multiple species. However, these findings also suggest that trying to match exact phenotypes in humans and mice may not be necessary or even optimal for determining whether similar genes influence a range of alcohol-related behaviors between the two species.

Indexed as

PhenotypeAlcoholismAnimalsCarrier ProteinsChoice BehaviorChromosomes, Human, Pair 15Disease Models, AnimalGenetic LinkageHumansMembrane ProteinsMiceQuantitative Trait LociSpecies SpecificityCarrier ProteinsMembrane ProteinsMPDZ protein, humanMpdz protein, mouse

Identifiers

PMID20148779
PMCPMC2848508
OpenAlexW2158447379

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.